| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4939 |
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| Symbol | |
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| ID | 8361115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6176362 |
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| End bp | 6177582 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644967088 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003124573 |
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| Protein GI | 256423920 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.485903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.767822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTC TTAACCTGAT AAGGATTGCT TTGAAAGCTT TGCAGCGGAA TAAACTGCGG
GCCTTTCTGA CCATGCTCGG TATTATTATC GGTGTGGCAG CGGTGATTGC AATGGTGGCT
ATCGGACAAG GCTCAAAGGA AAGTATACAG TCACAACTGT CCAGTATGGG GTCCAATATG
ATCACCATAC TGCCGGCCAG TAATGTGACA GGGGGCGCCA GACTGGAAGG AGCGAGCGTA
CAGACGTTAA CCATAGAAGA TGTAAAAGCG ATTCAGAAAC AGGCACTTAA TATCAGTGCG
ATTTCACCGG CCGCCAATTC CAGCGGACAA TCCATCAACG GGGCCTTTAA CTGGCCGACC
AGTATACAGG GCGTAGCGCC GGGATATCTG GATATCAGGA AATGGAGTCT CCAGGATGGC
GTGCCATTTA CGGATGAAGA TGTGAGAGCG TCTGCAAAGG TTTGTCTGCT GGGGCAAACT
GTTGTCAGTA ATCTGTTCCC TAATGGAGAT AACCCCGTAG GGAAGATCAT CCGCTTCAAT
AATATTCCAT TCCAGGTGAT CGGAATACTG GCCGCCAAAG GACAGAGTTC TTTCGGGCAG
GACCAGGATG ATGTGATATT AGCACCGTAT ACGACGGTGC AGAAACGTAT CCTGGCTACC
ATCTATTTCA GGACGCTTTA TGTCTCTGCG GTCAGCGAGG CGGCGACAGA TGCCGCCACA
AAGGAAATTG AGACTATCCT GCGGAAATCC CACCGTCTGA GAGATGCGGA TGAAAATGAC
TTCCAGGTGA GGACTATGGC TGAGTTAATC AATACGTTGA GTTCTACCAG TAACCTGCTG
ACGATTCTGT TAACTGCCAT TGCGGGTATA TCCCTGGTTA TTGGAGGGAT CGGTATCATG
AATATCATGT ATGTGTCCGT AACAGAGCGT ACGCGGGAAA TCGGCCTGCG TATGTCTATC
GGTGCAAGAG GGATAGATAT ACTGATGCAG TTCCTGATAG AGGCCATCAT GATCAGTATC
ACCGGTGGTC TGATAGGTGT TGTGTTAGGC ATCACTTCTG CCTGGCTGAT CACGTTTTTT
TTACATTGGC CGACGCTGGT ATCTGAATCG TCGATTATAC TGTCTTTTAT GGTGTGTGCA
TTGACAGGCG TCTTCTTCGG CTATTATCCT GCGCAAAAAG CCTCCCGGCT GGATCCGATA
GAGGCTTTGC GATATGAATA A
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| Protein sequence | MNILNLIRIA LKALQRNKLR AFLTMLGIII GVAAVIAMVA IGQGSKESIQ SQLSSMGSNM
ITILPASNVT GGARLEGASV QTLTIEDVKA IQKQALNISA ISPAANSSGQ SINGAFNWPT
SIQGVAPGYL DIRKWSLQDG VPFTDEDVRA SAKVCLLGQT VVSNLFPNGD NPVGKIIRFN
NIPFQVIGIL AAKGQSSFGQ DQDDVILAPY TTVQKRILAT IYFRTLYVSA VSEAATDAAT
KEIETILRKS HRLRDADEND FQVRTMAELI NTLSSTSNLL TILLTAIAGI SLVIGGIGIM
NIMYVSVTER TREIGLRMSI GARGIDILMQ FLIEAIMISI TGGLIGVVLG ITSAWLITFF
LHWPTLVSES SIILSFMVCA LTGVFFGYYP AQKASRLDPI EALRYE
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