Gene Cpin_4934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4934 
Symbol 
ID8361110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6170568 
End bp6171854 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content46% 
IMG OID644967083 
Productmagnesium transporter accessory protein 
Protein accessionYP_003124568 
Protein GI256423915 
COG category[S] Function unknown 
COG ID[COG3174] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.936542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATGATC AAGTAGAGCA TTTTGATGTT TTATCCATTG CAATGAAAAT TGCGGTCGCC 
GTGGGTATAG GTATGTTAAT TGGCCTGGAG AGAAACTGGT CGCATAAAGA GGCAGGCATC
CGGACGTTTT CTATCGTTTC ACTGACAGGC ATGTTATGTA TGCAGATAGA TACAAGCCTC
GTTGTGGCAG GACTTGCTGC CGTATGCCTG CTGATCATTA TATCGAATCT AAAGAGCTTT
CTGACAGACA GAAGCTCGGA GATGACTACC TCTGCTGCGC TGATAGCCTG CTATATATTG
GGAGTGCTGA TCGGCAGAGG GCATATATTT ACACCGGTGG CAGCAGCTAT TGTGATCACC
ATGTTGCTGG CCTGGAAGTC GGAATTAAGG AAGTTTGCCG GCGGACTGGA ACCTTCAGAA
ATAAGAAGTG CGATCCTGCT TGGATTGATT GGTTTTGTTA TATATCCGTT GTTGCCCGAC
CGCTATATTG ACCGCTGGGA GATTGTTAAT TTAAGTGATG CCTGGGTCAG TATCATAGCG
ATTGCCGGTA TCGGCTTTCT CAACTATATT TTCCTGAAAT TATTTAGTTC AAAGGGGCTG
TATCTTGGCG CCGTTTTCGG AGGACTGGTC AACAGCACTG CTACGATAGC GGAGATGACT
ACGCGGGTGG AAGAATCAGG TACACCCTCA AGAATTACGA TTTTGTCGAG TATCATCAAT
ATTTCCATGT TTACAAGAAA TATGATACTG GCAGCCATCT TTGTTCCGTT GTCCCTGACA
GCAACTTTAC TTCCACTGCT GGCCATGTCC TGTGTAGCTG GTTTCTGGAT CTGGCGCGAT
TTACAACAGG AAGCCGCTTA TGGCGAAGTG GAGCAGGAGC TGCAGCTAAC TTCACCTATA
TCTGTAAAGA AAATTCTATC CTTTGGCTTA TTGTTTTTAA TGATTCAGAT AGGCGGTACA
TTGCTGACCC GTATGTTGGG GGAAGGTGGC TTACTGGCCA CCGGCTTTCT GGGAGGACTA
GTCAGCAGTG CAAGTACCAC CGCTGCTGCA GCTACCATGG CTTCCCATGG ACAGATCTCG
CCTGCATTGG CCGGTAGTAC TGCAATACTA TCATCGATGG CCAGCGCATT GGTAGACTTT
CCAATAGTAT GGAAGAATAT CAAGGATAAG CGACTGGTGA AGGCTTTTAG TCTGAAATTG
ACAAGTGTGC TTCTGGTGGG CTTTGCAGCA GTGGCCCTTG ACCATATCTT CAAGATATCA
GAAGCGTTGA TCAATGCTAT AAAGTAG
 
Protein sequence
MNDQVEHFDV LSIAMKIAVA VGIGMLIGLE RNWSHKEAGI RTFSIVSLTG MLCMQIDTSL 
VVAGLAAVCL LIIISNLKSF LTDRSSEMTT SAALIACYIL GVLIGRGHIF TPVAAAIVIT
MLLAWKSELR KFAGGLEPSE IRSAILLGLI GFVIYPLLPD RYIDRWEIVN LSDAWVSIIA
IAGIGFLNYI FLKLFSSKGL YLGAVFGGLV NSTATIAEMT TRVEESGTPS RITILSSIIN
ISMFTRNMIL AAIFVPLSLT ATLLPLLAMS CVAGFWIWRD LQQEAAYGEV EQELQLTSPI
SVKKILSFGL LFLMIQIGGT LLTRMLGEGG LLATGFLGGL VSSASTTAAA ATMASHGQIS
PALAGSTAIL SSMASALVDF PIVWKNIKDK RLVKAFSLKL TSVLLVGFAA VALDHIFKIS
EALINAIK