Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4934 |
Symbol | |
ID | 8361110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6170568 |
End bp | 6171854 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644967083 |
Product | magnesium transporter accessory protein |
Protein accession | YP_003124568 |
Protein GI | 256423915 |
COG category | [S] Function unknown |
COG ID | [COG3174] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.936542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAATGATC AAGTAGAGCA TTTTGATGTT TTATCCATTG CAATGAAAAT TGCGGTCGCC GTGGGTATAG GTATGTTAAT TGGCCTGGAG AGAAACTGGT CGCATAAAGA GGCAGGCATC CGGACGTTTT CTATCGTTTC ACTGACAGGC ATGTTATGTA TGCAGATAGA TACAAGCCTC GTTGTGGCAG GACTTGCTGC CGTATGCCTG CTGATCATTA TATCGAATCT AAAGAGCTTT CTGACAGACA GAAGCTCGGA GATGACTACC TCTGCTGCGC TGATAGCCTG CTATATATTG GGAGTGCTGA TCGGCAGAGG GCATATATTT ACACCGGTGG CAGCAGCTAT TGTGATCACC ATGTTGCTGG CCTGGAAGTC GGAATTAAGG AAGTTTGCCG GCGGACTGGA ACCTTCAGAA ATAAGAAGTG CGATCCTGCT TGGATTGATT GGTTTTGTTA TATATCCGTT GTTGCCCGAC CGCTATATTG ACCGCTGGGA GATTGTTAAT TTAAGTGATG CCTGGGTCAG TATCATAGCG ATTGCCGGTA TCGGCTTTCT CAACTATATT TTCCTGAAAT TATTTAGTTC AAAGGGGCTG TATCTTGGCG CCGTTTTCGG AGGACTGGTC AACAGCACTG CTACGATAGC GGAGATGACT ACGCGGGTGG AAGAATCAGG TACACCCTCA AGAATTACGA TTTTGTCGAG TATCATCAAT ATTTCCATGT TTACAAGAAA TATGATACTG GCAGCCATCT TTGTTCCGTT GTCCCTGACA GCAACTTTAC TTCCACTGCT GGCCATGTCC TGTGTAGCTG GTTTCTGGAT CTGGCGCGAT TTACAACAGG AAGCCGCTTA TGGCGAAGTG GAGCAGGAGC TGCAGCTAAC TTCACCTATA TCTGTAAAGA AAATTCTATC CTTTGGCTTA TTGTTTTTAA TGATTCAGAT AGGCGGTACA TTGCTGACCC GTATGTTGGG GGAAGGTGGC TTACTGGCCA CCGGCTTTCT GGGAGGACTA GTCAGCAGTG CAAGTACCAC CGCTGCTGCA GCTACCATGG CTTCCCATGG ACAGATCTCG CCTGCATTGG CCGGTAGTAC TGCAATACTA TCATCGATGG CCAGCGCATT GGTAGACTTT CCAATAGTAT GGAAGAATAT CAAGGATAAG CGACTGGTGA AGGCTTTTAG TCTGAAATTG ACAAGTGTGC TTCTGGTGGG CTTTGCAGCA GTGGCCCTTG ACCATATCTT CAAGATATCA GAAGCGTTGA TCAATGCTAT AAAGTAG
|
Protein sequence | MNDQVEHFDV LSIAMKIAVA VGIGMLIGLE RNWSHKEAGI RTFSIVSLTG MLCMQIDTSL VVAGLAAVCL LIIISNLKSF LTDRSSEMTT SAALIACYIL GVLIGRGHIF TPVAAAIVIT MLLAWKSELR KFAGGLEPSE IRSAILLGLI GFVIYPLLPD RYIDRWEIVN LSDAWVSIIA IAGIGFLNYI FLKLFSSKGL YLGAVFGGLV NSTATIAEMT TRVEESGTPS RITILSSIIN ISMFTRNMIL AAIFVPLSLT ATLLPLLAMS CVAGFWIWRD LQQEAAYGEV EQELQLTSPI SVKKILSFGL LFLMIQIGGT LLTRMLGEGG LLATGFLGGL VSSASTTAAA ATMASHGQIS PALAGSTAIL SSMASALVDF PIVWKNIKDK RLVKAFSLKL TSVLLVGFAA VALDHIFKIS EALINAIK
|
| |