| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4925 |
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| Symbol | |
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| ID | 8361101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6159836 |
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| End bp | 6161959 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644967074 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_003124559 |
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| Protein GI | 256423906 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3347] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02632] rhamnulose-1-phosphate aldolase/alcohol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000252534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.445415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGTTT CTTCCTTAAC AAATTTCAAA CACGTAAGCT ATCTCTGGGA TGAACAGAAG
GCCGCAGCAT TGGCGGGGGA TGAAGTAGCA CTGCTGATTT ACCGTTCTAA CCTGCTGGGA
GCCGATTTAA GGCTGACGAA CTATGGTGGC GGTAATACTT CCTGTAAGGT AATGGCCAGA
GATCCGCTTA CTGGTAAACA AACGGAAGTC ATGTGGGTAA AAGGTTCCGG CGGAGACCTC
GGAACACTGA AACGCAGTGG CCTGGCTGCT TTATATGTCG ACAGACTGCA TAGCCTCGAA
AACATCTACA GGGGAATAGA GCATGAAGAT GAGATGGTGG AACTGTTCAA TCACTGCATC
TTTGACCTGA GCTCAAAAGC ACCTTCTATT GATACGCCAT TACACGGTTT TCTGCCGTTC
AAACATATAG ATCACCTGCA TCCTGATGCT GCTATCGCGA TTGCTGCAGC GAAGGATGGT
AAACGTATCA CGCAAGAGTT ATTTGGTGGT ACAATTGGTT GGGTACCCTG GCAGCGTCCG
GGTTTTGATC TTGGTCTGCA ACTGAGGCAA TGCCTGCAGG ATAATCCAGG TATCAGAGGT
ATTATGCTGG GTTCACATGG TCTGTTTACC TGGGGAGATA CCGCATACGA AAGCTATATC
AATACCCTGG AAGTGATTGA GCGTTGTGCT GCTTACCTGG AAGAACATTA TGGCAAAAAA
GGACCCGTAT TTGGCGGTGC GCGTATTAGT GCTCCGGATG CGGAAGTGCG TAAGAAACAG
GCAGCTGCAC TGGCGCCGGT ATTACGTGGA CTCTGCTCTG GTCATACACG CATGGTAGGA
CATTTCACGG ATGATCCGCG CGTACTGGAA TTTATCAATT CAAAAGACCT CGACAGATTG
GCTCCACTGG GTACCAGCTG TCCGGATCAC TTCCTGCGTA CGAAGATTAG TCCGCTGGTA
TTGCCATTAG ATCCTCAGGC TTCGCTGGAA GACGTAGCGG CAGTCAAGCA ACAGCTGGAA
CCGTTGTTTG CCGCCTACAG GGCGATGTAT ACCGACTATT ACAGCACCTG TCGTCATCCG
AACAGTCCGG CTTTACGTGA TCCTAACCCT GTAGTGATCC TTTATCCGGG CATTGGTATG
TTTACTTTCT CAAAAGACAA ACAGACAGCC AGGGTGGCAG CGGAGTTTTA TACCAATGCA
ATTAACGTCA TGAAGGGCGC AGAGGCGATC TCTGAATATA CCGCTTTGCC CAGACAGGAG
GCTTTTGATA TTGAATACTG GTTGCTGGAA GAGGCGAAGT TACAGCGTAT GCCAAAGCCG
AAGGCATTGT CTGGTCGTAT CGCATTGATT ACCGGTAGTG CAGGTGGTAT CGGAAAGGCG
ATTGCAAAGA GATTTGCCGA TGAAGGCGCA TGTGTGATCA TTAATGATAA TGATGCCGGC
CGACTGCAAT CTGCAAAAGA AGAATTTACT AAACAGTACG GAGCAGATGT TTTTACAACG
GCTGTGCTGG ACGTCACAAA GGCGACAGAT ATACATGCGG CTTATGAGGT GGCCAGCCTG
GCATTCGGCG GCGTTGATAT GGTGGTGAAT TGTGCCGGTT TGTCGATTTC CAAACCATTA
GAGGCGCATA CGGAGAAAGA CTGGGATCTG TTGTATGATG TACTGGTAAA AGGTCAGTTC
CTGGTAACAC AGCAGGGCGT GGAAGTAATG CGTAAACAGG ATCTTGGCGG AGACGTCATT
AATATCGTCA GCAAAAATGC ATTGATGAGT GGTCCGAATA ATGCAGGCTA TGGTTCTGCG
AAAGCTGCTC AGTTACATCT GAGCCGTCTG AATGCAGCAG AACTGGGTAA AGACGGTATA
CGCGTGAATG TGATCAACCC GGATGCTGTT ATTGCAGATA GTAAAATATG GGAAGGCGAC
TGGGCTGCCG GTCGTGCGAA AGCGTATGGT ATTACGGTGG AAGAACTGCC GGGTTACTAT
GCGAAACGTA CCCTGTTAAA CCAGGTGATC CTTCCTGAAG ATATTGCCAG CGCCTGCTTC
GCTGTTACCG GTGGTTTGCT CGGCAAATCA ACCGGCAATG TGATCAACGT AGATGGCGGT
GTTGCGGCGG CATTTGTAAG ATAA
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| Protein sequence | MSVSSLTNFK HVSYLWDEQK AAALAGDEVA LLIYRSNLLG ADLRLTNYGG GNTSCKVMAR
DPLTGKQTEV MWVKGSGGDL GTLKRSGLAA LYVDRLHSLE NIYRGIEHED EMVELFNHCI
FDLSSKAPSI DTPLHGFLPF KHIDHLHPDA AIAIAAAKDG KRITQELFGG TIGWVPWQRP
GFDLGLQLRQ CLQDNPGIRG IMLGSHGLFT WGDTAYESYI NTLEVIERCA AYLEEHYGKK
GPVFGGARIS APDAEVRKKQ AAALAPVLRG LCSGHTRMVG HFTDDPRVLE FINSKDLDRL
APLGTSCPDH FLRTKISPLV LPLDPQASLE DVAAVKQQLE PLFAAYRAMY TDYYSTCRHP
NSPALRDPNP VVILYPGIGM FTFSKDKQTA RVAAEFYTNA INVMKGAEAI SEYTALPRQE
AFDIEYWLLE EAKLQRMPKP KALSGRIALI TGSAGGIGKA IAKRFADEGA CVIINDNDAG
RLQSAKEEFT KQYGADVFTT AVLDVTKATD IHAAYEVASL AFGGVDMVVN CAGLSISKPL
EAHTEKDWDL LYDVLVKGQF LVTQQGVEVM RKQDLGGDVI NIVSKNALMS GPNNAGYGSA
KAAQLHLSRL NAAELGKDGI RVNVINPDAV IADSKIWEGD WAAGRAKAYG ITVEELPGYY
AKRTLLNQVI LPEDIASACF AVTGGLLGKS TGNVINVDGG VAAAFVR
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