| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4822 |
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| Symbol | |
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| ID | 8360998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6022213 |
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| End bp | 6024705 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644966972 |
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| Product | glycosyl hydrolase 38 domain protein |
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| Protein accession | YP_003124457 |
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| Protein GI | 256423804 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0383] Alpha-mannosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000118458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000000299684 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACATA CTATTCTTTT CCTCGCGGTG TTATGCACCG TTGGGGTGGG GCAGTCCATT
GCCCAGCAAC ACTATTTTAT CGATGGTTAT CATGGCGGCA AGTACGGACA CTATCCGGCA
GGATATACCC AATACATTGT AGCGCAATTA GAGGCGCATC CTGCATGGAA GATCAACCTG
GAAATTGAAC CTGAAACCTG GGATGTGGCA AGGGTGGAAG AGCCGGCTGC ATATGCCAGG
CTGCAACAGT TATTTGCCGA TCAGTCAGAT GCAGGTAGGA TCGAATATGT CAATCCGGGT
TATGGACAAA GCTATCTGTA CACCGGTTCT GGCGAGAGTA TGATCCGGCA GTTCAGTTAC
GGGATGCAGC ATATCAGACA GCATTTTCCG GGCGCCGTTT TTAGTACTTA TTCCAGTGAA
GAGCCCTGTT TTACCAGTGC ATTGCCGCAG GTGCTGTTAT CCCTTGGCTT TAAATATGCG
TCTCTTAAAA ACCCGAATAC CTGCTGGGGT GGATATACCC GTGCCTTTGG TGGTGAAGTG
GTACAATGGC AGGGACCTGA CGGCAGCATA GTACCCACCG TGCCGAGATA CGGGGCAGAA
GCATTGTTGC CCAATTCCAC CTGGCAGACG ACCGCCTGGA ATAACAGCAG CGAGTATATA
CAATCAGCGC TTGCTGCCGG TATCCGGCAG CCAATAGGGA TGTGTTTACA GGACGCCGGC
TGGCGTAATG GTCCCTGGTT AAAACAACAG GCGATATATG AAACCTGGCG TCATTATATC
GGTCATGTAG CAGATACGCA ACATGCTGCC GTATGGGCAT TCAGTCAGGA AGACGTGCAG
GTGAGTCTTG TATGGGGCGC ACAGGCTTTG CAACGTATCG CACAGCAGGT CAGACAGGCA
GAGAATAAAC TGGCGGCCGC AGAAAAGTAC GCAGCTATCA GTTCGCTGGT ACAGCATGGT
CCCTGGCCCA AGGCGGCCCT GGATAGTGCC TGGAAGACTT TGTTACTCTC GCAGCATCAT
GACTGCTGGA TCGTGCCTTA TAATGGCCGT AAAGGCGATA CCTGGATAGA CAAGGTGCAG
CACTGGACGG ATAATACGCT CCGTGTGAGT GATAGTATTC TGTTGCGGGG AACGGAGACA
AGCCGTGCTG TACGTGTGCT CAACACAACT GCCATTGCAA GAGAAGAGTG GGTCGTGGTA
CCAGCTTATA AAGGCGCTTC GGCAAAGGTG ACTGATAACA AGGGCAAGGC GGTAAAAGCC
TATATACAGC GGGATGGTTC ACTGATATTT AAAGCCAGTG TGGCGCCGAT GGGATTCAAT
GTTTATCATA TCAGTGAAGG TGCAAAGACT GCTGCTGCTC CAACACGCAA CAGACAATTA
GCAGATGGTC GTTACCAGAT AGAGACAGAT CAATACCGGA TGCTCATAGA TCCGGCCAGA
GGAGGGATTA TTACCAGTCT GATTGCGAAA CAACTGAACA ACCGGGAAAT GGTAGACCGT
AAACATCCGC GCAGTTTTAA TGAACTGAGG GGCTATTTCT ATCAGCAATC GGCCTGGCGT
TCCAGCACTG ATACGGCGGC TGTTGTAAGG CTGAAAGAAA ACAATCCTGC ACAGACGGTA
GTAGAGATCA AAGGTGCTAT TGGCGGACAT CCGTTTACGC AACTGATCAC CTTAGCGAAT
TCCACAAGCC GCATAGATAT GCAGCTGAAA ATTGACTGGC AGGGTGAACC AGGTATTGGT
GCGCCTCCGG CAAAGCATTA TCGGGTGGAA GATTATCACA AAGCATTTTA TAACGACAGT
TTCAAATTAC AGATCCTGCT TCCGCTCAAT CTGGCACAGC AGCAGTTAAG TAAAGATGCG
CCGTATGATG TAACAGCGAG CCGGTTGACA AATACTTTTT TCAGTAGCTG GGATAGCATC
AAGAATAATG TATTGTTACA CTGGGCTGAT GTGACAGATG GAAAGACCGG ACTGGCACTC
TTTGCGGATC ATACGACGAG TTATGTACAT GGAGAAAACT ATCCGCTGGG CTTTACGGTG
CAATTTACCG GTACTGCATT ATGGGGCCGC AATTATAATG TGACAGGACC CACAGACGTA
CACTATGCGA TTCTTCCCCA TAGCGGGGCA TGGGATAAAG GTGGCGTGAG TGAAGAAGCT
GCCCGCTGGT GTGAACCACT GGAATTATTG CCTGCTACCG GCGAAGCTGC ATTTTCCCTG
CTCTCGGTGG CCGATCAGCG CTGGCAGGTA CCTGCGATGA TGATGGATGG AGATGATCTG
TTGATCCGTG TGTATAATGC TGCCGGTGAT AACAGGGAAC ATACCTTGTC AGTTTCCGGT
ACGGCTTCTG CGGTCATCCT GGAACGACTG GATGGTCAGG CACTGGAAAC GCTTCCGGCA
GTACAACAGA CTGGTAATAC AGTCATCCGT TTAGCGATAC CTCGTTTCGG TATCCGCACC
ATTCGTTTAA AAAATATAAA TATTCAACAT TAA
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| Protein sequence | MKHTILFLAV LCTVGVGQSI AQQHYFIDGY HGGKYGHYPA GYTQYIVAQL EAHPAWKINL
EIEPETWDVA RVEEPAAYAR LQQLFADQSD AGRIEYVNPG YGQSYLYTGS GESMIRQFSY
GMQHIRQHFP GAVFSTYSSE EPCFTSALPQ VLLSLGFKYA SLKNPNTCWG GYTRAFGGEV
VQWQGPDGSI VPTVPRYGAE ALLPNSTWQT TAWNNSSEYI QSALAAGIRQ PIGMCLQDAG
WRNGPWLKQQ AIYETWRHYI GHVADTQHAA VWAFSQEDVQ VSLVWGAQAL QRIAQQVRQA
ENKLAAAEKY AAISSLVQHG PWPKAALDSA WKTLLLSQHH DCWIVPYNGR KGDTWIDKVQ
HWTDNTLRVS DSILLRGTET SRAVRVLNTT AIAREEWVVV PAYKGASAKV TDNKGKAVKA
YIQRDGSLIF KASVAPMGFN VYHISEGAKT AAAPTRNRQL ADGRYQIETD QYRMLIDPAR
GGIITSLIAK QLNNREMVDR KHPRSFNELR GYFYQQSAWR SSTDTAAVVR LKENNPAQTV
VEIKGAIGGH PFTQLITLAN STSRIDMQLK IDWQGEPGIG APPAKHYRVE DYHKAFYNDS
FKLQILLPLN LAQQQLSKDA PYDVTASRLT NTFFSSWDSI KNNVLLHWAD VTDGKTGLAL
FADHTTSYVH GENYPLGFTV QFTGTALWGR NYNVTGPTDV HYAILPHSGA WDKGGVSEEA
ARWCEPLELL PATGEAAFSL LSVADQRWQV PAMMMDGDDL LIRVYNAAGD NREHTLSVSG
TASAVILERL DGQALETLPA VQQTGNTVIR LAIPRFGIRT IRLKNINIQH
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