| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4813 |
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| Symbol | |
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| ID | 8360989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6005559 |
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| End bp | 6007265 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644966963 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003124448 |
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| Protein GI | 256423795 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00404134 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000000282037 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAGCAAT TCCCAACTAT ATTTCTCCTG GCCGGCTTCC TGATTGCCCT GGTGGCCTGC
CAAAAGGATT ACGAAGCGGT ACCGCTTGAG AAAGTGACGA TAGAATATGT CTTTGATAAA
GACGATTCCC TGGGTACTTA TGCGAATAAG TTCCTGAATA CGGTGTATTC CAAATTACCC
GGCGGTTACA ACCGCGTAGG CGGAGATCTG CTGGATGCAG CCTCTGATGA TGCTATTTCT
GGTTTTACGG GTACTACCAG CGTGTCTAAA CTGGCGACAG GCGCTTATAC CTCTTTTGAG
ACGATTGCGG AAGAAACACC CTGGAACAGC GCTTATTCGG CTATCCGGGC GGCAAGCATC
TTTGTGTCCA ATATCAATAT TTCTCCGGTG AAGGATAAGT TGCCAAATGG TAATTCTGTG
CGTTATGCCT GGAAGGCGGA GGCGCGGTTT ATCAGGGCGC TGTTTTATTT CGAATTACTG
AAGCGTTATG GAGGTGTGCC TCTGATGGGT GATGAAGTAA GGGAATTAGG AGATGATGTA
CAGGTGCCAC GTAGTTCTTT TGAGGAATGC GTACAGTATA TCGTTGGTGA ATGTGATGCG
ATCAAGGATA GTCTGCGTCC GAATCCCGTT GTAGCGCCGG AGCTGAACAG TCACCGTGCT
ACCAGAGGTG CAGCACTTGC ATTAAAAGCA AAGGTATTAT TGTATGCTGC GAGTCCGCTG
TTTAACGGAG AGAATATCGA TGCAGGCAAT CCACTCACCG GTTATACCGG CTATAATAAA
GAGCGCTGGA AACTGGCGGC AGATGCAGCA AAAGCGTTGA TAGATGAAAA GACTTTTTCT
TTGCTGCCTA ACTTCAAAGA TATCTTCATC ACACAGAATA ACAGTGAGGT CATCTTTTTC
CGTCAGGGAG GCAATACAAC GGATATAGAA TCAACGAACG GTCCCGTAGG TTTTGCGCAG
GTAGCCCGTG GTCGTACCAA TCCGACACAG GAGTTGATAG ATGCGTTTCC TACGGATGCA
GGGTTACCCA TTACCGACCC GGCCTCAGGA TATGATGCGA ATGCGCCTTA TGCACATCGT
GATCCACGTC TGACCATGAG CATCATTTAC AATGGTACGA GATGGCTGAA TACGGAGATA
CAAACGTATG AAGGCGGTCA GCACAGACCA GGCGGAGCGG AACCTGGTAC CAAGACAGGG
TACTATATGC GCAAGTTCAT GGGCAATTTT GAGAATGCGA CCCAATACAG TAATACCAGT
CATGACTGGA TACTGCTGCG CTATACCGAA GTGCTGCTCA ATTTCGCAGA AGCGGAAAAC
GAATACAATG GGCCAACAGG AGAGGTGTAC CAGGTATTGA AAGACCTGCG TGCCCGTGCC
GGTATCACAC CTGGAGATAA TGGGCTGTAT GGCTTACGTC CGGGTTTATC TCAGGATGAA
ATGCGTGAGC AGATCCGCAA TGAGCGTCGT ATAGAGCTGG CTTTTGAAGA GCATCGTTTC
TGGGATATCC GTCGCTGGAA GATCGCACAG CAGGTGTATG GTAATCCGCT GCATGGCATG
AGCATCATCC GCAACGGTGG AGATCTGTCT TATAGCGTAG CGGAAGTCTT CAAACCGGTA
TTCAGTGCCC CGAAAATGTA CCTGTATCCT ATACCGTACG ACGAGGTAGT GAAAAACGAC
AATATGCGCC AGAATCCTGG ATGGTAA
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| Protein sequence | MKQFPTIFLL AGFLIALVAC QKDYEAVPLE KVTIEYVFDK DDSLGTYANK FLNTVYSKLP
GGYNRVGGDL LDAASDDAIS GFTGTTSVSK LATGAYTSFE TIAEETPWNS AYSAIRAASI
FVSNINISPV KDKLPNGNSV RYAWKAEARF IRALFYFELL KRYGGVPLMG DEVRELGDDV
QVPRSSFEEC VQYIVGECDA IKDSLRPNPV VAPELNSHRA TRGAALALKA KVLLYAASPL
FNGENIDAGN PLTGYTGYNK ERWKLAADAA KALIDEKTFS LLPNFKDIFI TQNNSEVIFF
RQGGNTTDIE STNGPVGFAQ VARGRTNPTQ ELIDAFPTDA GLPITDPASG YDANAPYAHR
DPRLTMSIIY NGTRWLNTEI QTYEGGQHRP GGAEPGTKTG YYMRKFMGNF ENATQYSNTS
HDWILLRYTE VLLNFAEAEN EYNGPTGEVY QVLKDLRARA GITPGDNGLY GLRPGLSQDE
MREQIRNERR IELAFEEHRF WDIRRWKIAQ QVYGNPLHGM SIIRNGGDLS YSVAEVFKPV
FSAPKMYLYP IPYDEVVKND NMRQNPGW
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