| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4791 |
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| Symbol | |
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| ID | 8360967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5971658 |
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| End bp | 5978416 |
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| Gene Length | 6759 bp |
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| Protein Length | 2252 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644966941 |
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| Product | PA14 domain protein |
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| Protein accession | YP_003124426 |
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| Protein GI | 256423773 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.45455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.215304 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTGC AAATAAGTGC AAAGAAAAAG AGGACGATTG CCTTCCTGTT ACTTGCTTTG
CTATATTTTG AAACACTGAT TCCTTCTTAC GCTCTGGCAG TAGCCAGATC AGCGACAGTC
TATAGTCGCC CGCCAGAGAA GAAGTATGTT AACCCCGCCT TACCGCATAG TGTGTCCAAA
GCAGTGACGC CGTTAATGGA GACGCATTCG CTTACAAAAG CCAAAGTATT TATCGGAGGT
CCCACACAAC CGGAAATGCA GTCTTTTGCT GCGGTTAATA ATGCGAATAT GGTAGATCTT
TTCACCGGTG ATTTTTCCTA TAGTATACCC CTACTGGACG TAGGTGGTTA TCCTATTACC
ATCGGTTACA ACAGTGGTGT CTCGATGGAT CAGGAAGCCA GTTGGGTGGG TCTTGGCTGG
AATATTAATC CGGGTACGAT CATGCGTAAT ATGCGTGGAT TACCCGACGA CTTCAGTGGA
ACGGCTGATT CCATACAAAA AGTAACAAAG ATAAAACCTA ATGAAACATA CGGAGGAGCG
ATAGGCGCTG ACTTTGAGTT TGCAGGCTTT CCGACAAAAG GGACGTTGAG CGATTCAAGT
ATCAGCATTA CTGCCTCAGC AGGTATATTC TATAACAACT ACAAGGGGCT TGGTACAGAG
GTGAAGATTA ATTCCAGCCT GAACGCCGGT TCATTAAGTA TGGGAGAATT TTCAGGTGGT
TTGTCGCTTG CCAATAATTC CCAGGATGGA GCAAGTGTGC GTAACACGAT CAGTTATTCA
CTGTTTGGAA ATCACACGAA AAAGCTTGGT GCTTTTGGTG GTAATATAAC GGTTGGTTCG
ACATACAGTT CTCGTTCAGG ACTAAAAGCA TTGCAATTGA GCGCTGGTCT GAGACAATAT
AAGATAGTTG ACAATAATTT ACGTCAGATT GCTAGTACTG GCATTGACAG AGCTGCTACA
TTGAGCTTTG CCTATCCATC TTATCTTCCT GATATCAGCC TTCCCTATAC GAGTTCTTCC
CTTAGTGTAA CCCTGAAGGC CGGTTCAACA AATAAGGTGT TACATCCCAA TCTTTTCATA
GAGGGATATG GATCTAAACA ATTCATAGCG GATGAAGACA CTCGTATGTC CCTGCCGGCT
TATGGTTATC TTAATTATCA GCAGGCCGGA TCTAATACTG CCGCGTTACT TGATTTTAAC
CGGGAAAGAG ATATTCCATA CCGGGAAAAA CCTGAAGTGC CGAATATTGG TATTCCTGCA
TATACCTATG ACGTTTTCTC CATATCTGGA GAAGGAACAG GAGGGATGTT CAGGGCTTAT
CGTGGTGATA TAGGATATGT GTTTGACCAC ACCATGAGGA CGAAGGACAA TTCTAAAAAT
GCAAGTATAG ATTTTGGTGC AGGCGACCTT GTACATGCAG GTCTGGATGT GACTTATAAT
AAATCGACGA CTACTACAGG GCCATGGAAA GAGTTAAATC CATTGGCTAC GAATGTAGCT
TTTTCTTCTT CTGATAAGTT ACATGAAGCT GCCTATTTCC GTAATCCGGG AGAGATGGCT
ATTAATGACA CTGCTTTTTA TGAAAATATC GGTGGTGATG ATGTGGTGGC TGTCAACCTG
GAACAGGGTG GTGTCAGCAG TCCAGATATC CGTACTACCA ACGTCCTGAA CCGCTACCGT
AACCAGCGTT TTGTCGGTAA GAAAGTGGCC GGTGTGAAGA AAATGAAAAA GGAAAATCGT
GATAAGCGCA CACAGGTTAT CTCTTACCTG ACCGCTGAAG AAGCAGACCA TGCAGGTCTG
AACAGGTATA TAGAAAATTA TGTAGAAAAC ATTTTCAAAG TTAACAATTG TACAGTCACT
TTCCCTGATG GGGCAGAAGG CGTTGGTAGA GGATGGATTG GGGAGTATTA TGCTGGTAGT
CTGGATCGTT TCCTGTTCAA GCGGGAGGAT ACCATCATTG CCTTTACAGA CAAAGAACAA
TTTAACTATT ATATGCCACC GGAGTCTCCC GTGGGCAGGT TCGATCACTC GTTTTCTGTC
CGCTGGACCG GCAGGGTAAA AGCGCCTGTA ACAGGTAAAT ACACCTTTTC GACAGCTTCT
GACGACGGGG TGAGATTTTA TATAAATGAT ACCCTGTTGA TAGACAACTG GGGTGGTCAT
CCTCCTACAC TTGATTCTGC TGTGGTGAAC CTGGTGGCCG ACCAGTTTTA TAATGTACGA
CTGGAGTATC GACAGGATAA AGAACGTGCG GTAATGGCAC TGGCATGGCG ATATGCTGGT
TTACCTTCGA ATTTCATTCC GAAACAGTAT CTCTATCACA TGCCGGAGAA AGACACTTTT
GTGTCAACCG ATGGCTCAAT TGTACAGGAA AAGAGAACCA ATGATTTCCG CAAGAAAAAT
CATCTTTCTG AAATTGATGT ATTGAACGCT GATGGCAGAA GATATGTCTA TGGTATCCCG
GTTTATAATA TTCAACAAAG GGAAGTCACA TTTGCAGCGT CACAAGAGGG TGCTGATAAA
ACAGCTGGCC TGATTCATTA TGCGCGGGGC ACAGATAATA CGACCGCTAA TCAGAATGGG
GTAGATCATT ATTTCAGTAG CGAACAGCTA CCGGCTTATG CGCATTCTTT CCTGCTGACA
GGTATCCTTT CTCCTGACTA CCAGGATCTT ACCGGGGACG GCATTTCTCC CGATGATCCG
GGGGATGCTA TTAAGTTCAA TTATACTAAG ACAGCCGGCA TTCGTAATGC CTATAAATGG
AGGGTGCCTA TGGGTGTAGA CTCTGCCAAT TATAGTGAGG GACTAAAGAC GGATTACCGG
GATGACAAAG CCAGTTATGT ACATGGGGAG AAAGAACTCT GGTATCTGCA TTCTGTGGAG
TCGAAGAATA TGATCGCGAC TTTTAAACTG ACCCAAAGGG ATGATCTTCG TGCTGTGGAT
GAAAATGGTG TAAGACTTAT GGATAATAAG ACCCGCAGAC TGGAAGAAAT CAATCTCTAT
ACAAAGGCGG AGTTTACAAG AAGCAGTCAT CCAAGACCAA TTAAAACAGT ACATTTTGAG
TACTCATATG AGCTGTGTCC CGGTGTAAGC GGAGATATTA ATAAGGGGAA ACTAACACTC
AAAAAGATCT GGTTTACCTA TAATGGTAAT GATAAGGGAC AACGTAATCC CTACATTTTC
AGTTATAACA AAAACAATCC TTCTTATAAA ACCAACGCCA GCGATCGTTG GGGGAATTAT
AAAGATCAGT TGCAGAACCC GGGATCTGTG ACTGGCAATG TGCTTACAAA CGCAGATTAT
CCATATGCCT TACAGGATAG TATACAGGCT GCAGATAATG CGGCTGCATG GGCTCTGGAT
AAGATTGTAC TGCCTTCTGG CGGACGAATG GAGATCTCTT ACGAAAGTGA TGATTATGCC
TTCGTACAGA ATAAACGTGC TGCTCAGCTT TTCAAAATTG CAGGTTTCTC GCCTGCAGCC
CCTTCGTCGT TGAATGATCT CAAGCCGGAA TTGTATGGCA TCATTGATTA TCTGTACGTT
GCGATAGATG TGCCATATAA GGTATATAGC AATGAGGAAT TATATAACCG TTATCTGCAG
AACATGGATA AGCTCTTTTT CCGTTTGTCA GTGCAGATGC CGGATGATAA GTTTGGAAGT
GGTAATGAGT ACGTCAACTG TTATGCGGCA GTAGACGAGG GAAACTATGG GTTCTTCAAT
CAGGGAAATA AATCGACGAT CTGGTTGCGC CTGAAGGCCG TTGACCCGGG CGCAAAAATG
AATACGGTAA AAAGCGTGTT TAGTCCGCTG GCACAATCCG CCTTGCAGTT CCTTCGCCTG
AACCTTGGTT CAAAAGCCTA CCCTGGTTCA GACCTTGGCG ATGATAATAT TGATATGGTA
GACGCCATAA AAATATTGTT ATCACAAGCT GACAACCTCA ATAATTTGCT GCTCACATTC
GAGACAGCAG CCCGCATGAA ACATTGGGCA AGAAAGGTAG ACCTCAGCAG GAGTTTTGTA
AGATTGAACA ATCCTTTTTA TAAGAAATAT GGCGGCGGGC ACCGCGTAAA GAAAGTCCTT
ATCTATGACC ATTGGAATAA GATGACAGGG CAGAAGGAGT CACTTTATGG TCAGGAGTAT
CAGTATACGA CTGTAAAAGA CATAGATGGT AAAAAACAAC TGATCAGCAG TGGTGTGGCC
GCGTATGAAC CCGTGATAGG CGGAGAGGAA AACCCATGGA AAGTACCTGT TGAATATAAT
CTGCAGGTTT CTAACCTGGT ACCGGTAGAT AGAGGTTATA CCGAATTGCC TTACGGCGAA
GGATTCTTCC CGGCTCCTTC AGTAGGATAT AGCAAGGTAC GTGTGCGAAC CATCCACGCT
GACAAGCATC GCTCAGCTAA TGGATATGAC GAAACCTGCT TCTATACCGG CTACGATTTT
CCAACATTAA CAGATGTCAC CAACCTGGGA GACAGTAAAA AACGGTTTAA ACCACTTCTT
TCTAATCTCC TGCGTATTAA TGCGCGTCAT TATCTCGGAT TAAGTCAGGG CTTTAAAGTG
GAATTGAATG ACATGACGGG GAAGATAAAA TCGCAGGCTT CCTATGGAGA GGCAGATCCG
GATAAGCCGA TTACTTATAC AGAATACTTC TACAAGGTAG ACAATCAACA GGCTTTGAAT
AAGCACCTGA ACAACACGGT AAAAGTGATC TCATCCAAGG GAGACATCGA TTCAGCGTCT
ATCGGAAAAG ATATTGAGCT GATGCTGGAT ATGAGACAAC AGCATTCTAC TACAATAGGC
TATAGTCTCA ATCTGAATGG AATGATGTTC AAGTTCGCCT GGCCGCCGGT ATTATTCATT
CCTGTACTAC TCAACCTGGT ACAAAGAGAA GAAACGAAAT ACAGTTCAGT TGCTGCTACA
AAGATTGTCT ATCGTCATGG TATTCTGGAC AGTGTATTAG CTATAGATAA AGGTAGCCGG
GTTACAACTA CTAACCTGCT GTATGATGCA GAAACGGGTA GTCCGCTGTT AACAAAAACA
CTCAATGAGT TTAACGACTC GTTGTATTCC TTTACTTATC CAGCCGCATG GGCCTATGAT
GGTATGAGTG GTGCATACAA AAACATAGGT CTTGAACTGG ATCATATCAC CATGAAAGAT
GGTCGTATTA CAGCGGGGCT TACAGAGAGC CCATCGTTGT ATTTCGCTGC CGGAGATGAA
ATACTGATCT ATTCTCATCA GAAGACAGGT GGTACGATCT GTGGTCCGGA AATAGCCACA
TTCCCGGCAT CTGCCTTTAT TTACACGGTT GATGCAAACG CGCTGGCTGG CGGTACGCCA
GATCTTTATT TTGTGGATAA GGACGGGAAT CCGTTTACAG GGAACGATAT TTCATTGAAG
ATCGTGCGTT CAGGCAGACG TAATATTAAT GGTGCGGTAG GCTCAGTTGT ATCACTGAAA
AATCCTATAC AGGGTAAGCA GCTTGTACTG GATAGCAGCA GGCAGATCAT TTCGTCATCT
GCAGTTGCTT ATAAGCAGTT CTGGCGGGTG AGTGACCGGA GAAAACAGGA TACATCATAT
GTATGTGTGA CACAACCTTA TAGCGAGTAT GTAGGAGCTG GTGGAGATTG TGGTATACGC
TACTATGGAA ACGTAGCGAA GAGTAAGTCC ATCAGGAAAA ATGACTGTGG TACGGGGGCG
ACAGGATCTG TGGTACTATA TAAGGTGGAT GCCAACAGGT ATACTTCTTA TATCAGCCAG
GCAAAGGCAG ATTCTATGGC ACAGGCAGAC ATTGACAGCT TCGGTCAGAG CTATGCCAAT
GCCCGTGGTA CCTGTACGTT TACCTATAAC AGCCGTATCG ACAGTGTGAT CATATTAAAT
CATACGTGTC AGGGGGATGC CATCCCATTG CCTTACACCT ATGTCGTGCC TTTCAAAACA
TTTACTTCTA CGATCAGTCA GGAGGATGCA GACGCGAAGG TGAAACAACG TTTGCTCGAT
AGTGCGCAGG TCGTGGCTAA CAGAAATGGC CGTTGCTATT ATAAGAACGA CACGACAGGT
ATTCTTGCGT ATTCAACATG TGAAAATGGT AGCGTAGGGC GTGGTGTTTG GGTACAGATA
CCTGCAGGAG TGGATACTTC TATGATTAGT AAAGATGCTG CCAATGCAAA GGCACGTGAT
GCTTACTGGG CATATGCAAA GGAAATAGCA AGACAGCAGG GCGGTTGTCT GTATAAGAGT
GTAGCGATGG ATACGACTGT TAAAAAGAAT AACTGTGACT CCGGTATTGG CACGAATGTG
CTCTATCAGA TTGCCGCAGG TAAATATGAG TCGGCAGTCA GCCAGTATGC GGCGGACTCT
ATGGCACACA AAGATTTGCG AGACAGTGCA CAGGCGTATG CAAATTTGAA TGGTATCTGT
CAGCCAGGTA TCTACGCTGT GCTTGAGCTC ACGCCAGCCG GTAATGACGG GGTAAAATCA
TATGCATTCC TGACAATGCA TTTTTACTCG GATTCGGCAT TGACGGTTCC TGTTTCGGTG
ACTAACCTTA GTGTAAACAT TGGAGCGATG AGATACTGGT GTAACGGTGA CACGGATGAT
ATTTCCTACT CAAGGGTATT TAACGGAACC AGTGATCGAT TCGAAAAGCC AATTGTAAAC
AGTAATGGTC AAAGTGGAAA CCCTTGCTAC AGTGTCTTCT TCTCTCTGAA AAATGGGAGC
GGATATATTA ATGCAGGAAC TATAGGAAGC GTTGACTGA
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| Protein sequence | MILQISAKKK RTIAFLLLAL LYFETLIPSY ALAVARSATV YSRPPEKKYV NPALPHSVSK
AVTPLMETHS LTKAKVFIGG PTQPEMQSFA AVNNANMVDL FTGDFSYSIP LLDVGGYPIT
IGYNSGVSMD QEASWVGLGW NINPGTIMRN MRGLPDDFSG TADSIQKVTK IKPNETYGGA
IGADFEFAGF PTKGTLSDSS ISITASAGIF YNNYKGLGTE VKINSSLNAG SLSMGEFSGG
LSLANNSQDG ASVRNTISYS LFGNHTKKLG AFGGNITVGS TYSSRSGLKA LQLSAGLRQY
KIVDNNLRQI ASTGIDRAAT LSFAYPSYLP DISLPYTSSS LSVTLKAGST NKVLHPNLFI
EGYGSKQFIA DEDTRMSLPA YGYLNYQQAG SNTAALLDFN RERDIPYREK PEVPNIGIPA
YTYDVFSISG EGTGGMFRAY RGDIGYVFDH TMRTKDNSKN ASIDFGAGDL VHAGLDVTYN
KSTTTTGPWK ELNPLATNVA FSSSDKLHEA AYFRNPGEMA INDTAFYENI GGDDVVAVNL
EQGGVSSPDI RTTNVLNRYR NQRFVGKKVA GVKKMKKENR DKRTQVISYL TAEEADHAGL
NRYIENYVEN IFKVNNCTVT FPDGAEGVGR GWIGEYYAGS LDRFLFKRED TIIAFTDKEQ
FNYYMPPESP VGRFDHSFSV RWTGRVKAPV TGKYTFSTAS DDGVRFYIND TLLIDNWGGH
PPTLDSAVVN LVADQFYNVR LEYRQDKERA VMALAWRYAG LPSNFIPKQY LYHMPEKDTF
VSTDGSIVQE KRTNDFRKKN HLSEIDVLNA DGRRYVYGIP VYNIQQREVT FAASQEGADK
TAGLIHYARG TDNTTANQNG VDHYFSSEQL PAYAHSFLLT GILSPDYQDL TGDGISPDDP
GDAIKFNYTK TAGIRNAYKW RVPMGVDSAN YSEGLKTDYR DDKASYVHGE KELWYLHSVE
SKNMIATFKL TQRDDLRAVD ENGVRLMDNK TRRLEEINLY TKAEFTRSSH PRPIKTVHFE
YSYELCPGVS GDINKGKLTL KKIWFTYNGN DKGQRNPYIF SYNKNNPSYK TNASDRWGNY
KDQLQNPGSV TGNVLTNADY PYALQDSIQA ADNAAAWALD KIVLPSGGRM EISYESDDYA
FVQNKRAAQL FKIAGFSPAA PSSLNDLKPE LYGIIDYLYV AIDVPYKVYS NEELYNRYLQ
NMDKLFFRLS VQMPDDKFGS GNEYVNCYAA VDEGNYGFFN QGNKSTIWLR LKAVDPGAKM
NTVKSVFSPL AQSALQFLRL NLGSKAYPGS DLGDDNIDMV DAIKILLSQA DNLNNLLLTF
ETAARMKHWA RKVDLSRSFV RLNNPFYKKY GGGHRVKKVL IYDHWNKMTG QKESLYGQEY
QYTTVKDIDG KKQLISSGVA AYEPVIGGEE NPWKVPVEYN LQVSNLVPVD RGYTELPYGE
GFFPAPSVGY SKVRVRTIHA DKHRSANGYD ETCFYTGYDF PTLTDVTNLG DSKKRFKPLL
SNLLRINARH YLGLSQGFKV ELNDMTGKIK SQASYGEADP DKPITYTEYF YKVDNQQALN
KHLNNTVKVI SSKGDIDSAS IGKDIELMLD MRQQHSTTIG YSLNLNGMMF KFAWPPVLFI
PVLLNLVQRE ETKYSSVAAT KIVYRHGILD SVLAIDKGSR VTTTNLLYDA ETGSPLLTKT
LNEFNDSLYS FTYPAAWAYD GMSGAYKNIG LELDHITMKD GRITAGLTES PSLYFAAGDE
ILIYSHQKTG GTICGPEIAT FPASAFIYTV DANALAGGTP DLYFVDKDGN PFTGNDISLK
IVRSGRRNIN GAVGSVVSLK NPIQGKQLVL DSSRQIISSS AVAYKQFWRV SDRRKQDTSY
VCVTQPYSEY VGAGGDCGIR YYGNVAKSKS IRKNDCGTGA TGSVVLYKVD ANRYTSYISQ
AKADSMAQAD IDSFGQSYAN ARGTCTFTYN SRIDSVIILN HTCQGDAIPL PYTYVVPFKT
FTSTISQEDA DAKVKQRLLD SAQVVANRNG RCYYKNDTTG ILAYSTCENG SVGRGVWVQI
PAGVDTSMIS KDAANAKARD AYWAYAKEIA RQQGGCLYKS VAMDTTVKKN NCDSGIGTNV
LYQIAAGKYE SAVSQYAADS MAHKDLRDSA QAYANLNGIC QPGIYAVLEL TPAGNDGVKS
YAFLTMHFYS DSALTVPVSV TNLSVNIGAM RYWCNGDTDD ISYSRVFNGT SDRFEKPIVN
SNGQSGNPCY SVFFSLKNGS GYINAGTIGS VD
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