Gene Cpin_4787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4787 
Symbol 
ID8360963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5960312 
End bp5960530 
Gene Length219 bp 
Protein Length72 aa 
Translation table11 
GC content43% 
IMG OID644966937 
Productdomain of unknown function DUF1813 HSP20 
Protein accessionYP_003124422 
Protein GI256423769 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000550607 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.903319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTG TAAGCAAAAC ACTTCGTCGT GGTAAACTGC ATGGTCAGTA TCAGGAAGTA 
AGTAATTACT GGCAGAAATA CCGTAAGGTG CCCTGGCTGA ATGTACGGGG TCTATGGCTG
GAAGAAGCGG GCTTTAATGT AGGGGATCCG ATAGAGATCA TTGTGAGTAA GGAAAAGCTG
ATCATTAAAA AGGCGCATGA TGGAAATAGC AGCCATTAA
 
Protein sequence
MKTVSKTLRR GKLHGQYQEV SNYWQKYRKV PWLNVRGLWL EEAGFNVGDP IEIIVSKEKL 
IIKKAHDGNS SH