Gene Cpin_4745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4745 
Symbol 
ID8360921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5919068 
End bp5920264 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content40% 
IMG OID644966896 
Productacyltransferase 3 
Protein accessionYP_003124381 
Protein GI256423728 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0151092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0124888 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCCT CATCAATTTT TAACCGGATC ACGTCTAACG GAAAATTTGT TCCGGAAGTA 
GACGGTTTAC GTTTTATTGC AGTATTTGCC GTTGTGATAG CTCATATTGA CGGCTTTTTT
GTTGATAAGG TAGAAGAGCT TTTACATCAG AAGGATAAGT GGCTATCCCT TTTTGATTAC
ATGCTGCAGG GAGGTGGCAT AGGTGTTTCG TTGTTTTTTG TTATCAGCGG CTATATACTT
GGGCTGCCAT TTGCCAATCA ATATCTTGGC GATGGAAAGA AGGTGGTTTT GCGTTCGTAT
TTTGTCAGGA GACTGACGCG TCTGGAGCCA CCGTACATGT TATGTATGAT TATGCTTTTC
GCTGTATTGG TGTATGTTTT ACATAAGTAT ACTTTCAGCG AGTTATTACC GAGTCTTCTG
GCATCGTTGA CTTATACGCA TAATCTTTTC TGGGACAGGT ACACTCTACC ACTTGTTAAT
GGAGTGGCCT GGAGTTTGGA AGTGGAAGTA CAGTTTTATA TTATGGCGCC GTTGCTCGCT
AGATTGTTTT TACTGCCGGC TGCAAAACGG AGAACTATTA TTTTGCTGAT ATGTGTATTA
ATGATTTCAG TAAGAAGTGT TTATCAGTTG CCGTACCGTA CGATTGTAGA TTCTATCCAG
TATTTCCTGA CAGGTTTTCT ACTCGCAGAT CTGAAAGTAA CTAATACGGT TCTGCCGCTT
AATAAGTCAT GGGTATGGGC AATAGGAATA CCGGCTTTAA TGCTGGTCTT TATATTGAAG
ATGATGCTGC CTAATAATGA TCCTGATCTG GTATTAAATA TGGGGCTGTT TATAGTCATT
GCTATTTTTA ACTATCTGTG TTTGTTTCAT GGCTTTATCA ATGGCTTTCT GACCAACAGG
ATTATTTTCA CAATCGGAGG TATGTGCTAT TCCATTTATC TGTTACATAC GGCTATTATT
TCTGCGTTTG GCAGCAAGTT CATTAATGGC TTCTTTTTTG ACTCAATATA TCTGAATCTG
GCGTTATTCA ATGTATTACA GCTTTGCCTG ATTATGGCGA TATCAGCTGT TTACTTTCTG
CTAATAGAGC GACCTTGCAT GGACAAACAC TGGCCACAAA AGCTGTTCGC ATTTTTCAGA
GGCCGCTCTA CAGTTTCATG GAAGACCATT CCTTATTTGC TCAGACCGAG GAAATGA
 
Protein sequence
MQPSSIFNRI TSNGKFVPEV DGLRFIAVFA VVIAHIDGFF VDKVEELLHQ KDKWLSLFDY 
MLQGGGIGVS LFFVISGYIL GLPFANQYLG DGKKVVLRSY FVRRLTRLEP PYMLCMIMLF
AVLVYVLHKY TFSELLPSLL ASLTYTHNLF WDRYTLPLVN GVAWSLEVEV QFYIMAPLLA
RLFLLPAAKR RTIILLICVL MISVRSVYQL PYRTIVDSIQ YFLTGFLLAD LKVTNTVLPL
NKSWVWAIGI PALMLVFILK MMLPNNDPDL VLNMGLFIVI AIFNYLCLFH GFINGFLTNR
IIFTIGGMCY SIYLLHTAII SAFGSKFING FFFDSIYLNL ALFNVLQLCL IMAISAVYFL
LIERPCMDKH WPQKLFAFFR GRSTVSWKTI PYLLRPRK