Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4730 |
Symbol | |
ID | 8360906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5904893 |
End bp | 5905858 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644966882 |
Product | Terpene synthase metal-binding domain protein |
Protein accession | YP_003124367 |
Protein GI | 256423714 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0913781 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0000445956 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCAACGA TCACCTTGCC TCGGATAATT TATCCGTTCC CCTCTCTTAT TAACCAATTT GTAACAGCAG CACACGAGCA AAACCGTCAA TGGGTAGCCG ATTTTGGCTT TATCACAACG CCCGAAGCTA TGGCCCGTTT TGACAGGTCC CGTTTTGCCT GGTTAGCCGC AAGGGCATTT CCTCATGCCG GTTTTCATGA ACTGTGTACC ATCGCCAACT TCAACACCTG GCTGTTTATG CTGGATGACC AGTGTGATGA AGCACAACTG GGAAAGAAAG CCGTTTACCT GGAACATGTT ACAGACGGCT TCATGAACAT ACTGAAACAT AATACACCCG TTGACACCGT GCTGGGAAGA AGTTTCACCG ACATCTGGGA ACGTATGCAA GCCCTCGGCG ATACCGCCTG GCAGACACGT TTCATCAGAA GTATGGAGGA ATATTTTACT TCCTGCCACT GGGAGGCCGG CAACAGAGCG GCGGATATCG TTCCTACCGT CGCAGAATAT GTCACCATGC GCCCTTACAC CGGTGCATTG TTCGCCGATG TGGAAGCCAT CGAGATCATA GAAAAAGTGT ATCTGCCTGC CCACATCCTC CAACACTTTA TCGTACAGCG TCTGGTACTC GCCTGCAATA ACATCGTATG CTGGGCCAAT GACATCTTCT CCTGCGCTAA AGAAGCCAGA CAGGGAGATG TACATAATCT CGTACTGGTA CTACAGCATG AACGTAACAG CACCTTGCAG GAAGCTGTCA ACGAGACCGC CAGGATGCAT AATGAAGAGG TAAAACTGTT TACCGCCCTC GAAAAACTGC TGCCTTCCTT TGGCGCGGAA ATGGATAGGG AACTGGAGCG GTTTATGGCA GTGCTTCGCT CCTGGATTAC AGCAAATTAT GACTGGAGTT ATCATGATAC CGGAAGGTAC CAGGTGAAAG AGGTGGAAGT AGTGATCAAT TCCTGA
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Protein sequence | MPTITLPRII YPFPSLINQF VTAAHEQNRQ WVADFGFITT PEAMARFDRS RFAWLAARAF PHAGFHELCT IANFNTWLFM LDDQCDEAQL GKKAVYLEHV TDGFMNILKH NTPVDTVLGR SFTDIWERMQ ALGDTAWQTR FIRSMEEYFT SCHWEAGNRA ADIVPTVAEY VTMRPYTGAL FADVEAIEII EKVYLPAHIL QHFIVQRLVL ACNNIVCWAN DIFSCAKEAR QGDVHNLVLV LQHERNSTLQ EAVNETARMH NEEVKLFTAL EKLLPSFGAE MDRELERFMA VLRSWITANY DWSYHDTGRY QVKEVEVVIN S
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