| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4694 |
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| Symbol | |
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| ID | 8360870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5853326 |
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| End bp | 5854111 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644966847 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_003124332 |
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| Protein GI | 256423679 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.483748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0110449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGCAA TACATTTTTA CAAATACCAG GGTACCGGCA ATGATTTCGT GATCATGGAC
AACCGGAACG GAGAATACAA TTTTCTTACA GAAGAACAGG TGCACTTTCT TTGTGACAGA
CGTTTCGGTA TCGGAGCGGA TGGTTTGATG CTGCTGAATA AACAGGAAGG ATATGACTTC
GGTATGAAGT ATTACAATGC CGATGGTCGT GAAAGCAGCA TGTGTGGTAA TGGTGGCCGT
TGCCTGGTAG CTTTTGCCCG TAAAATGGGA CTGACAGACG AAAAACTGAG CTTCCTCGCA
GTGGATGGTC CACATGAAGC GACCTTAAAA GGCGATGATT GGGTGAACCT GAAAATGCAG
GACGTGAGCG GTGTTGAGAT CAATTCCCTT CATTCTTACC TGAATACCGG TTCTCCACAT
TATGTGAAAT TTGTAGCAGA TGTGAAAGCG GTAGATGTAT ACAACGAAGG TAAACAGATC
CGCTACAACG ACCGCTTTGC CAAAGAAGGC ACTAACGTAA ACTTTGTACA ATCGCTCGAT
AAAGGCATCT TCGTACGTAC CTATGAACGC GGTGTCGAAG ACGAAACCTA CTCCTGTGGT
ACAGGCGTAA CAGCAGCAGC ACTGATGACT GCCGGTGCAG AAACAAAAGA ATACATCGTA
CCTGTACAGA CGCTGGGCGG TAAACTGGAA GTACGCTTTA CCCGCATCGG TGAAAAAGCC
TACAACAATA TCTGGCTTTG CGGACCCGCT ACCCTTGTAT TCGAGGGAAA TATCACATTG
CCATAA
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| Protein sequence | MSAIHFYKYQ GTGNDFVIMD NRNGEYNFLT EEQVHFLCDR RFGIGADGLM LLNKQEGYDF
GMKYYNADGR ESSMCGNGGR CLVAFARKMG LTDEKLSFLA VDGPHEATLK GDDWVNLKMQ
DVSGVEINSL HSYLNTGSPH YVKFVADVKA VDVYNEGKQI RYNDRFAKEG TNVNFVQSLD
KGIFVRTYER GVEDETYSCG TGVTAAALMT AGAETKEYIV PVQTLGGKLE VRFTRIGEKA
YNNIWLCGPA TLVFEGNITL P
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