| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4665 |
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| Symbol | |
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| ID | 8360839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5821581 |
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| End bp | 5822381 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966816 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003124303 |
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| Protein GI | 256423650 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.871012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000000383418 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAAATA AGGTCGTAGT CATCACCGGG GGTACATCCG GTATTGGAAA GGCACTGGCA
ATAGCTGCCC TCCGCGGCGG AGCGAAAGTC GCCGTGTGTG GCAGAAAGGC AGATACACTC
CAAGCACTTG AAAAAGAACT CGCTACCGAT AACCTGTACA CCTATACCGC TGACGTCAGC
AAGGAAGATG ATTGCAAACA CTTCATCGAC CAGGTAATTG CCCGACTCGG TAGAATAGAT
GTTCTGATCA ATAACGCTGG TATTTCCATG CGCGCTTTGT TCAAAGATGC TGATCTGACA
GTACTTAAGC AATTGATGGA TATCAACTTC TGGGGAACTG TATATTGCAC AAAATATGCT
TTACCGTCAT TGCTGGCGAA CAAAGGTACC GTCGTAGGTG TATCTTCTAT AGCAGGTTAC
AGAGGCTTAC CCGGTCGTAC CGGTTATTCT GCCTCCAAAT TTGCTATGCA GGGTTTCCTC
GAAGCACTAC GCACCGAAAA TCTGCATACA GGCATTAACG TAATGTGGGT AAGTCCAGGC
TTCACCTCAT CGAATATCCG AAACACCGCC CTCAATGAAC AGGGTCGTGC ACAGGCAGAA
ACACCGCTGG ATGAAGGAAA ATTAATGAGC GCTGAAACTG TGGCAGATGA AATACTCAAA
GCTGTCACAA AACGGAAACG CACATTGGTG CTTACAGGGC AGGGCAAACT GACAGTTTTC
CTCAGTAAAC TTTTCCCCGG ACTGCTCGAT GGACTGGTGT ATAACCATTT TAAGAAAGAA
CCAGGTTCAC CACTTCAGTA A
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| Protein sequence | MQNKVVVITG GTSGIGKALA IAALRGGAKV AVCGRKADTL QALEKELATD NLYTYTADVS
KEDDCKHFID QVIARLGRID VLINNAGISM RALFKDADLT VLKQLMDINF WGTVYCTKYA
LPSLLANKGT VVGVSSIAGY RGLPGRTGYS ASKFAMQGFL EALRTENLHT GINVMWVSPG
FTSSNIRNTA LNEQGRAQAE TPLDEGKLMS AETVADEILK AVTKRKRTLV LTGQGKLTVF
LSKLFPGLLD GLVYNHFKKE PGSPLQ
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