Gene Cpin_4598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4598 
Symbol 
ID8360771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5741840 
End bp5742271 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content48% 
IMG OID644966752 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_003124240 
Protein GI256423587 
COG category[S] Function unknown 
COG ID[COG2764] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACACG TTAGTCCTTA TCTCAATTTC AATGGCACCT GCGAAGCTGC CTTTAATTTC 
TACAAATCTG TGTTTAACGG CGAATTCATG AATGGCATCA TGCGGTTCAG CAATATGCCG
GAGCATTGCA AACCAGGAGA CGAAAACCTG GTGATGCATG TGGCGCTGAC TATTCCAGGT
GGGAATACGA TAATGGGTAG TGACTTCCCC GATTCGATGG GCGAGTTTAA AAAAGGCAAC
GACTTCTCAC TGGCTATCTC TGCCGGATCT GAAGAAGAGG CCCGCAGGTT ATTTGATGCG
CTTGGTGCAG GCGGTATTGT TGATATGCCG CTGGATAAAG CGCCCTGGGG CGCTTTATTT
GGTCAGCTGA AGGACCAGTA TGGCATTACC TGGGCGGTGA ATTACCAATA CGAACCAATC
CCTCAACATT AA
 
Protein sequence
MAHVSPYLNF NGTCEAAFNF YKSVFNGEFM NGIMRFSNMP EHCKPGDENL VMHVALTIPG 
GNTIMGSDFP DSMGEFKKGN DFSLAISAGS EEEARRLFDA LGAGGIVDMP LDKAPWGALF
GQLKDQYGIT WAVNYQYEPI PQH