Gene Cpin_4571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4571 
Symbol 
ID8360744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5715302 
End bp5716270 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content48% 
IMG OID644966726 
ProductActivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_003124214 
Protein GI256423561 
COG category[S] Function unknown 
COG ID[COG2764] Uncharacterized protein conserved in bacteria
[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.811205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.992213 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAG CAATTCTTTT TGATTTTGTG GTAGACAAGG AAAACAACAG GATCAAAGTA 
GACCGGTCAT TTGATGCCCC GCTGGATCTG GTATGGACCG CCTGGACGGA TGCTGAGATC
CTTGACCAGT GGTGGGCGCC CAAGCCCTAC CGTGCTGAAA CAAAATCGAT GGATTTCCGT
GAAGGTGGCA GATGGCATTA TGCCATGGTA GGCCCTGAGG GCGATAAACA ATGGTGCCTG
TTTGATTACG AAACCATTCA ACCCGAGCAA AGCTATTCAG GTATCGATGC ATTCTGCGAT
GAAAACGGCA TATTGAATCC GGATCAGCCC CGTATGCGCT GGAATAACCG CTTTAATGAG
CGACCGGATA ATACGACTGT CGTGAATATA GAGGTACGCT TTAATCAGCT GTCCGACCTG
GAAACCATCC TTCAGATGGG CTTCAAGGAA GGCTTCTCCA TGGGACTGGA AAACCTGGAT
GCCTATATCA GTGCCCAGTT TTACCTGAGA AAACAAAAGA AACCGGGCAA CAAAGCCAGG
GTCTCCTTTT ACCTTAATTT TCCTGGTAAT ACGGAAGAAG CGCTTTTTTT CTATAAATCC
GTTTTTAAGA CGGACTTCGT GAATGGCATA CAGCGCTTTG GCGATATACC CGCTGACGCA
GGAAATCCTC CGATAGCAGA ACCAATAAAG AAAATGGTCT TACATGCGGA ATTGCCTTTA
ATAGGCGGCG CCATCCTGAT GGCGACGGAT GCCCCGAAAG AAATGGGCTT CAACCTGACA
CAAGGCAACA ATATGCATAT TAACCTGGAA CCTGAAAGCA GAGAAGAAGC GCTACGGATC
TTTGAGGCAC TGTCAGAAGG TGGCGAAATC ACCATGCCGC TGCAGGACAT GTTCTGGGGT
GCTTACTACG GTAGTTTTAA GGATAAATAC GGCATCAACT GGATGGTCAA CTACCAGCAG
GCCAACTAA
 
Protein sequence
MSKAILFDFV VDKENNRIKV DRSFDAPLDL VWTAWTDAEI LDQWWAPKPY RAETKSMDFR 
EGGRWHYAMV GPEGDKQWCL FDYETIQPEQ SYSGIDAFCD ENGILNPDQP RMRWNNRFNE
RPDNTTVVNI EVRFNQLSDL ETILQMGFKE GFSMGLENLD AYISAQFYLR KQKKPGNKAR
VSFYLNFPGN TEEALFFYKS VFKTDFVNGI QRFGDIPADA GNPPIAEPIK KMVLHAELPL
IGGAILMATD APKEMGFNLT QGNNMHINLE PESREEALRI FEALSEGGEI TMPLQDMFWG
AYYGSFKDKY GINWMVNYQQ AN