Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4543 |
Symbol | |
ID | 8360716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5668540 |
End bp | 5669715 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644966698 |
Product | aminotransferase class V |
Protein accession | YP_003124186 |
Protein GI | 256423533 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.119486 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATTC AAAAGATCAG AAGAGATACT ATCGGCTGTG AACAGCTAAT TCATTTGAAT AATGCAGGTG CCGCGCTGAT GCCGGCAGTG GTAGCCAATG GTATCAGGGA TTATATTTCA GCAGAAGAAA CCGGCGGTGG TTATGAGACT GCTGACAAGT ACAGCGCTGA ACTGGATCAG TTCTATACCT ACATGGCCAA ACTGTTGCAT TGCAGATCCG AAAACATCGC CTTTACCACC AATGCTACTG ACAGCTTCAA CCGTGCCTTG TCTGCCGTGC CATTCAAACA GGGAGACGTC ATCCTGACGA CAGAAAACGA CTACCCTTCT AATTTTATCG CCTTTATTTC TCTGCAGAAA AGACTGGGAA TAGAGATCGT CACAGTGCGA AATACACCTT CCGGTGAAAC TGACCTGGAA GACCTGGAAC AAAAGATCAA CACACTTCAA CCACGCCTTG TGTCAGTCAC ACATGTACCT ACCAGTTCCG GACTCGTACA ACCGGTAGCC GCAATCGGTA ATATCACTAA ACGTTATGAT ACTTTGTATC TGCTGGATGC GTGTCAATCC GTCGGACAAC TAGCCGTTGA CGCCATTGCT ACAGGCGCTG ATTTCATCAG CGGCACCTTC CGTAAATTCC TGCGGGGCCC CAGAGGCGCT GGCTTTTTAT ATATCTCTGA TAAAGCATTA CAAAGCGGAT TAGAACCATT GTTCCCGGAT CTGAGAGGCG CCGAATGGAC CGGTATCCAT GCCTATACAC ACCGGGAAGA TGCCAAACGT TTTGAAGACT GGGAAACAGC CTTTGCGCTG ATGGCGGGAA GTACTGCTGC CATAAAATAC CTGCTGGATA TAGGAATACA GGAGGTGCAA ACCCGGAATG AAACGCTTAC CGCTTACCTG CGGCATCAGC TAGGCAATGT ACCTGGCGTA CAGTTACAGG ACAAAGGAAA ACACCCCTGC AGTATCGTTA CCTTCAGTAT AGCGAACCAG GAACCGGAGC GTTTCAAACA ATATTTCAAA CAACACGGCG TCAATATTTA CACCACTGCC AGGTCGTCTG CTATCATTGA TTTCACACAG AAGGGCATTG AATGGGTGGC AAGAGTATCA CCGCACTATT ACAACACGGA AGCAGAGATC GACCGGTTTA TGCAACTGCT GACTGCGATC GCTTAA
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Protein sequence | MDIQKIRRDT IGCEQLIHLN NAGAALMPAV VANGIRDYIS AEETGGGYET ADKYSAELDQ FYTYMAKLLH CRSENIAFTT NATDSFNRAL SAVPFKQGDV ILTTENDYPS NFIAFISLQK RLGIEIVTVR NTPSGETDLE DLEQKINTLQ PRLVSVTHVP TSSGLVQPVA AIGNITKRYD TLYLLDACQS VGQLAVDAIA TGADFISGTF RKFLRGPRGA GFLYISDKAL QSGLEPLFPD LRGAEWTGIH AYTHREDAKR FEDWETAFAL MAGSTAAIKY LLDIGIQEVQ TRNETLTAYL RHQLGNVPGV QLQDKGKHPC SIVTFSIANQ EPERFKQYFK QHGVNIYTTA RSSAIIDFTQ KGIEWVARVS PHYYNTEAEI DRFMQLLTAI A
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