Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4501 |
Symbol | |
ID | 8360674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5603425 |
End bp | 5604375 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644966656 |
Product | Alpha-N-arabinofuranosidase |
Protein accession | YP_003124144 |
Protein GI | 256423491 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3507] Beta-xylosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.570213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.69004 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAAT TGAAGATCAG TCAGATGAAG GGAATGATCA TGCGTTCGTT CTCCATCGCA TGTATGGCAT TGTCGGCGCT TTCATCCAGT GCACAAAAGA ACCCGTTTAT TACAGATATA TACACTGCAG ATCCTTCGGC GCATGTATGG TCAGATGGCA GATTATACGT ATACGCTTCT CATGATATAG CACCGCCCCG TGGATGCGAT CTGATGGACC AGTATCATGT TTTCTCTACA GATGATATGG TAAACTGGAA AGATCATGGA GAGATCCTGC GTGCCAGCCA GGTTCCCTGG GGAAGAAAGG ATGGTGGTTT TATGTGGGCG CCTGATTGTG TATTCAGAAA AGGTACCTAT TATTTCTATT TCCCGCATCC AAGCGGCGAT GAATGGAATA AGACCTGGAA GATAGGCGTG GCGACGAGCA ACAGTCCTGC TGAAGGATTT AAGGTACAGG GTTTCCTGCC TGATCTGGAA CCCATGATCG ATCCATGTGT ATTCATCGAT GACGACGGTC TGGCCTATTT CTATTATGGC GGTGGCGGTG TCTGTAAAGG TGGTAAACTG ATGGATAATA TGCTGGAAAT AGACGGCACT ATGCAACCAA TGGAAGGGCT GGTAGATTTT CATGAAGCTA CCTGGGTACA CAAACGCGAT GGCGTGTATT ACCTGTCTTA TGCTGATAAT AACGACAAAG ACGGTAAGCA CAACCAGATG CGTTATGCGA CCAGTGACAG TCCGCTGGGA CCATGGACTT ACCGTGGCAT CTATATGGAT CCGACAGACA GTTATACCAA TCACGGTTCT ATTGTAGAAT ACAAAGGACA GTGGTATTCT TTCTATCATA ATAGTGCATT GTCACATCAT GACTGGTTAA GGTCTATTTG CGTGGACAAA CTGTTTTATA ACACTGATGG CACCATCCAG AAAGTAGTAC AAACGAAATA A
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Protein sequence | MQQLKISQMK GMIMRSFSIA CMALSALSSS AQKNPFITDI YTADPSAHVW SDGRLYVYAS HDIAPPRGCD LMDQYHVFST DDMVNWKDHG EILRASQVPW GRKDGGFMWA PDCVFRKGTY YFYFPHPSGD EWNKTWKIGV ATSNSPAEGF KVQGFLPDLE PMIDPCVFID DDGLAYFYYG GGGVCKGGKL MDNMLEIDGT MQPMEGLVDF HEATWVHKRD GVYYLSYADN NDKDGKHNQM RYATSDSPLG PWTYRGIYMD PTDSYTNHGS IVEYKGQWYS FYHNSALSHH DWLRSICVDK LFYNTDGTIQ KVVQTK
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