Gene Cpin_4485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4485 
Symbol 
ID8360658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5576217 
End bp5577020 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content48% 
IMG OID644966640 
Productcobalamin-5-phosphate synthase CobS 
Protein accessionYP_003124128 
Protein GI256423475 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0368] Cobalamin-5-phosphate synthase 
TIGRFAM ID[TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0546206 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAG AGGTCCGCAT ATTTCTGACT GCATTGATGT TCTTCACCCG TATACCGGTG 
CCCTCGCGTA TAGATCACAA TACGGCTGAT CTGAATAAGT CCAGCCGCTA TTTTCCGATG
GTGGGTATAC TGGTGGGACT GATCGGCGCT GTTATCTTTG CCGGAGCAAA TGCCCTGTTC
AAAGATATCT TTACAGCAGT CATCCTTTCT GTGATGGCGA CATTACTGAC GACAGGCGCT
TTCCATGAAG ACGGTCTTGC TGACGTAGCG GACGGTTTTG GTGGCGGCTG GACCAAGCAG
CGTATCCTGG AAATCATGAA AGATTCCCGT GTGGGCGCCT TTGGTGTAAT TGCCATCATT
ATGACTTTAC TGTTGAAGAT TTGTCTGCTG GCCAAGTTGG CATTGGTTAT GATCAACACA
CAGCTACTGC CTTTCTGCCT ACTGTACATC GCCGCACATG CATTCAGCCG TACCATGCCG
GTATACCTCT TACGCTTCAT GGCTTATTCC CGCGAAGATG ACAGCACCTC CAAAAGCAAG
CCACTGGCAA CAAAGATCAG CTGGCCGGGT TTCATACTGG CTAACATCAC GGGGATTATA
CCCTTGTTAC TGCTGATCAT CTGGTTCCAT CACTCATGGC TGCTTCTGCT GGTTATAATA
CCCTGCGGCC TATTGACCAT CTACCTGTCC TGTTATTTCA GCAAATGGAT TAACGGTTAT
ACGGGCGATT GCCTGGGGGC AACGCAACAA CTTAATGAAG TCATTTTTTA CATGGGCATA
CTGGCAATAT GGAATTACAT CTGA
 
Protein sequence
MKKEVRIFLT ALMFFTRIPV PSRIDHNTAD LNKSSRYFPM VGILVGLIGA VIFAGANALF 
KDIFTAVILS VMATLLTTGA FHEDGLADVA DGFGGGWTKQ RILEIMKDSR VGAFGVIAII
MTLLLKICLL AKLALVMINT QLLPFCLLYI AAHAFSRTMP VYLLRFMAYS REDDSTSKSK
PLATKISWPG FILANITGII PLLLLIIWFH HSWLLLLVII PCGLLTIYLS CYFSKWINGY
TGDCLGATQQ LNEVIFYMGI LAIWNYI