| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4484 |
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| Symbol | |
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| ID | 8360657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5575174 |
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| End bp | 5576214 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644966639 |
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| Product | nicotinate-nucleotide/ dimethylbenzimidazolephosp horibosyltransferase |
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| Protein accession | YP_003124127 |
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| Protein GI | 256423474 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0372935 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTACAT TCCATATTGC CCCCCTCAAC AATGATATTA CGGCGGCACT GCAACACAAG
ATAGACAGCA AAACAAAACC AATTGGCTCA TTAGGACAGC TGGAAAAACT GGCTTTACAG
ATCGGCCGGA TACAACAGAC ACAGACCCCT GCGCTGAATA AACCCACCAT CGTTGTTTTT
GCCGGCGATC ACGGTGTTGC GCATGAAGGC GTGAGTCCTT TTCCACAGGA AGTGACCTAT
CAGATGGTCT TTAATTTCCT GCAGGGCGGC GCTGCCATCA ACGTATTTAC AAAGCAGAAC
GGTATTGCAA TCAAAGTCGT AGATGCGGGT GTCAACTTTG ATTTCAACCA ACATCCCGGC
TTGGTACATG CTAAGGTGGC TCTGGGTACC AAAAGCTTCC TGCATGAAGC AGCCATGACG
CCTGCGCAAT GTGAGACAGC CATTGAAAGA GGTGCCGCGG TTGTGAAAGA ATTACATGAA
CAGGGCTGTA ATGTGATCGG ATTCGGGGAA ATGGGCATCG CCAATACCTC CGCAGCAGCA
GTAATTATGA GTCTGCTCTG TGATATTCCA TTGGAACAAT GTATTGGCAG AGGTACCGGA
CTGGATGACG AAGGGCTGAT CAGGAAGAAA GTGATCCTGG CAGAATCTAT GATCCGTCAT
AACAAAATTG AAAAAACGCC CCTGAACGTA CTCAGTACTT TCGGTGGATT TGAAATAGCC
ATGATGTGTG GCGCCATGTT ACAGGCGGCG GCAGCTGGTA TGCTGATACT GGTAGATGGT
TTTATCACCA CATCTGCATT ACTGGTCGCT GCGAAGATAA ATGAGCAAAT ATTGGACTAC
TGCCTGTTCA CCCACCAGTC GAACGAGCAG GGTCATAGTC TGATGCTGGC CCACCTGAAA
GCTGTACCTT TATTAAGCCT GGGTATGCGC CTGGGAGAAG GTACCGGCGC TGCTGTTGCC
TACCCTGTTA TACAGGCTGC TGTAAGCTTC CTGAATGAAA TGGCCAGCTT TGAATCGGCC
GGTGTGTCCA ACAAAGCATA A
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| Protein sequence | MTTFHIAPLN NDITAALQHK IDSKTKPIGS LGQLEKLALQ IGRIQQTQTP ALNKPTIVVF
AGDHGVAHEG VSPFPQEVTY QMVFNFLQGG AAINVFTKQN GIAIKVVDAG VNFDFNQHPG
LVHAKVALGT KSFLHEAAMT PAQCETAIER GAAVVKELHE QGCNVIGFGE MGIANTSAAA
VIMSLLCDIP LEQCIGRGTG LDDEGLIRKK VILAESMIRH NKIEKTPLNV LSTFGGFEIA
MMCGAMLQAA AAGMLILVDG FITTSALLVA AKINEQILDY CLFTHQSNEQ GHSLMLAHLK
AVPLLSLGMR LGEGTGAAVA YPVIQAAVSF LNEMASFESA GVSNKA
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