Gene Cpin_4475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4475 
Symbol 
ID8360648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5565939 
End bp5567294 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content48% 
IMG OID644966630 
Productprecorrin-3B C17-methyltransferase 
Protein accessionYP_003124118 
Protein GI256423465 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1010] Precorrin-3B methylase 
TIGRFAM ID[TIGR01466] precorrin-3B C17-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.253543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0484497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTAA GCGTAGTTGG TATAGGACCC GGCGGTAAAG ACTATATCCT GCCTGTTGCA 
CAACAGGTAC TGGCCACGGC TGATATTGCC ATCGGGTACA GTTACTATTT TCAGTTCGTG
GAGCACCTCC TGCCCACATA CTGTGAATGT ATCGGGAAAG ACCTGACAGA AGAGGAAGCC
CGTGCCGAAC TGGCTGTCAA TCGTTGTGAA CCAGGTAAAC ATGTGGTGGT GATCAGTTCC
GGAGATGCAG GTATTTATGC CATGGCCTCA CTGGTATATC AATATGCCAG TACCCGTACT
GACAAACCGA TTGATCTGCA GACCATCCCC GGTATCAGTG CTTTCATCGC TGCCGCAGGC
CGATTAGGCG CACCACTGGG ACATGACTTC TGCTGTATCT CTTTATCCGA TCTGATGACG
CCCTGGCCCG TAATAGAAAA ACGGATACAG GCAGCTGCTA TCGGCGATTT CGTGACTTCC
TTATATAATC CGAGAAGTAA AAAACGCTTC TGGCAACTGG CACGCTTCCG GGAACTATTC
CTCCTGCACA GAGATCCCGC AACGCCTGTA GCGATTATCC GCCAGGTAAC CAGACCGGAA
GAAACCATTA CCATCACGAC ACTGGGTGAT ATGGATGTAG CATCCGTAGA TATGTTTTCA
CTGGTGATGA TCGGCAATTC GCAGACGTAT CAGTTTAACA ATCACCTGGT AACACCGAGA
GGTTATATGG CGAGGAAACC TGCTTCCGGA CAGGAAATAC AGGATGAAAG TTTCCGTCAG
ATCGCTGCGC AACTGAAACG CGAGGACGTC AGCGAAGCAG ATAAGTGGGC GATTATGCGC
TGTATCCATA CAACGGCTGA CTTTGAATAT GAAGACCTGT ATTTGTCGAA TAATGACGCT
ATTGCACAAT GGCATGATTA TCTCAGCACC GGTGGTACGA TCGTGACAGA CGTGACCATG
GTACAATCAG GTATTACGAA AGAATTTATC AAAAAATATA ATGCCAATGT CTACTGCTAT
CTTAATGATG AAGCAGTATT GCCTTTAGCA GAAAAAGAAG GATTGACCCG TAGTCAGGCA
GGCATGCGTA TCGCTATTGA AAAACACCCG GATGCGCTGT TTGTCGTAGG CAATGCACCT
ACCGCCCTGT TTGAACTCTG CGATCAATTA CAGGAACGGA AGTTCTGCCC TGCCGGCATT
ATCGGTGCAC CGGTAGGATT CGTCAATGTG ATTGAATCAA AACTGAAACT GCAGGCCATT
AAAACAGTGC CTTATGTGAT CATCCGCGGA AGAAAAGGCG GCAGTAACGT AGCGGCCAGT
ATCGTCAATG CAGCATTCAC CGTAAAAGAC AGGTAG
 
Protein sequence
MKLSVVGIGP GGKDYILPVA QQVLATADIA IGYSYYFQFV EHLLPTYCEC IGKDLTEEEA 
RAELAVNRCE PGKHVVVISS GDAGIYAMAS LVYQYASTRT DKPIDLQTIP GISAFIAAAG
RLGAPLGHDF CCISLSDLMT PWPVIEKRIQ AAAIGDFVTS LYNPRSKKRF WQLARFRELF
LLHRDPATPV AIIRQVTRPE ETITITTLGD MDVASVDMFS LVMIGNSQTY QFNNHLVTPR
GYMARKPASG QEIQDESFRQ IAAQLKREDV SEADKWAIMR CIHTTADFEY EDLYLSNNDA
IAQWHDYLST GGTIVTDVTM VQSGITKEFI KKYNANVYCY LNDEAVLPLA EKEGLTRSQA
GMRIAIEKHP DALFVVGNAP TALFELCDQL QERKFCPAGI IGAPVGFVNV IESKLKLQAI
KTVPYVIIRG RKGGSNVAAS IVNAAFTVKD R