Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4463 |
Symbol | |
ID | 8360636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5554733 |
End bp | 5555758 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644966618 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003124106 |
Protein GI | 256423453 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.29527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.178629 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAACA GCACAAACAA CTACAACGGC GCCTTACAAC ACCCGATCGG CTCGGGTTTC GACGCCGCGT CAACAGCAAC GGACGTTATC AAAGGCATTT CTCTCCAGGG TAAAACAGCA ATCATTACCG GCGGTTACTC AGGCATTGGT CTGGAGGCGG CAAAAACACT GGCCAATGCA GGCGTGGAGG TCTATATCCC TGCAAGAACA ATCGAAAAAG CAGCTGGCAA TCTCGCAGGT ATCCCCAATG TCACCATACT GGAAATGGAC CTGATGGATC CTGCTTCCAT CGACGCTTTC GCAGAAAAAT TCCTGGCACT GAACAAACCA CTGGACATCC TGATCAACAA CGCAGGTGTG ATGTGGACGC CGTTAAGACG TGACGCCCGT GGGTATGAGT CACAGTTCTC TACCAATCAC CTTGGACATT TCCAGCTGAC CGCACGTCTC TGGCCGGCTA TCAAAAGTGC GCAGGGGGCA AGGATTGTAA ACGTTTCTTC CTGGGGACAT CACATGGCGT CAATAGATCT GAATGATCCT AATTTCGACC ATCAGGCATA TGACCCTTCC GTTTCTTATG CGCGGGCGAA ACAGGCCAAT GTCCTGTTTA CCGTCGAACT GGACAAACGG GCACAGGCAC ACGGTGTAAG ATCCTTTTCA CTGCATCCCG GGGCTATTGC CGTGACAGAT CTTGGCAGGG ATATCCCGGA AGAAGGCTTC AGGGCTTTAG GCGTATATGA GGAAGATGGC AGTTTCCGCC ACGATCCTTA CAATGGCTAT AAAACATTAG AAGAAGGTGC TTCCACAACA GTCTGGTGCG CTACAAGCCC TAAATTGGCC AATATAGGGG GTGTTTATTG TGAGGATACG GAAGTGGCTG CAATCGACCA GGACTGGCAA GGCTTTAAAT CAGACAAGTT TGAAATGACC AAAGGGGTGA CTGCCGAGGC GGTTAATGGC GAAAAAGCCC AACAACTCTG GACACTCAGC GAAAAATTAA CTGGTATCAC GTTTGCCGTA TCCTGA
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Protein sequence | MANSTNNYNG ALQHPIGSGF DAASTATDVI KGISLQGKTA IITGGYSGIG LEAAKTLANA GVEVYIPART IEKAAGNLAG IPNVTILEMD LMDPASIDAF AEKFLALNKP LDILINNAGV MWTPLRRDAR GYESQFSTNH LGHFQLTARL WPAIKSAQGA RIVNVSSWGH HMASIDLNDP NFDHQAYDPS VSYARAKQAN VLFTVELDKR AQAHGVRSFS LHPGAIAVTD LGRDIPEEGF RALGVYEEDG SFRHDPYNGY KTLEEGASTT VWCATSPKLA NIGGVYCEDT EVAAIDQDWQ GFKSDKFEMT KGVTAEAVNG EKAQQLWTLS EKLTGITFAV S
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