Gene Cpin_4407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4407 
Symbol 
ID8360580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5490157 
End bp5490918 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content47% 
IMG OID644966566 
Productphosphate ABC transporter, ATPase subunit 
Protein accessionYP_003124054 
Protein GI256423401 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1117] ABC-type phosphate transport system, ATPase component 
TIGRFAM ID[TIGR00972] phosphate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0221693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAG AGAAGATTAA GCTGTCAGCA GCAGGCGTGA ACCTCTGGTT TGGCAATAAA 
CAGGTATTAA AGCAGATAGG TGTCAGCTTT CCCGAGAATA AGGTAACGGC GCTGATCGGT
CCTTCAGGAT GCGGAAAGAG CACCCTGCTG CGTTGTTTTA ACCGGATGCA TGACCTCTCT
CCGGATGCAA AGATAGAAGG ACAATTCCTG CTGGGAAAAC AGGATCTCTA CAACCGGGAT
ATCTCCGTTA CGCAGGTGCG GCGAAGGGTT GGAATGGTGT TTCAGAAGGC AAATCCTTTC
CCGAAAAGTA TCTATGAAAA CATCAACTAC GGACTTAAAA TAAATGACGT ACCTCCCAGT
GAAAGACTGG GTATCATAGA AAGTGCATTG AAAGAAAGCT TTCTGTGGGA TGAAGTAAAA
GACGATCTGA AAAAACCGGC GACCCGTTTG TCTGGTGGTC AGCAACAACG ACTATGTATC
GCAAGAACGG TCGCATTGCG TCCGGAAGTG ATCCTGATGG ACGAACCCTG TTCTGCACTC
GATCCGATAA GTACGGGAAA GATAGAAGAC CTGATCAGAA AGTTACAGGA CCAGTATACT
ATCGTGATCG TTACGCATAA CATGCAACAG GCGCAACGTG TAGCAGATAA AACGGTATTT
ATGTACCTGG GAGAAGTAGT GGAAGCAGGC AATACAAAGG ACATTTTCGA CCACCCGCAA
CAGGAGCTGA CCGCTAATTA TGTCAGGGGA CATTTTGGTT GA
 
Protein sequence
MSEEKIKLSA AGVNLWFGNK QVLKQIGVSF PENKVTALIG PSGCGKSTLL RCFNRMHDLS 
PDAKIEGQFL LGKQDLYNRD ISVTQVRRRV GMVFQKANPF PKSIYENINY GLKINDVPPS
ERLGIIESAL KESFLWDEVK DDLKKPATRL SGGQQQRLCI ARTVALRPEV ILMDEPCSAL
DPISTGKIED LIRKLQDQYT IVIVTHNMQQ AQRVADKTVF MYLGEVVEAG NTKDIFDHPQ
QELTANYVRG HFG