Gene Cpin_4340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4340 
Symbol 
ID8360513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5398114 
End bp5398461 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content47% 
IMG OID644966501 
ProductKaiB domain protein 
Protein accessionYP_003123989 
Protein GI256423336 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.464711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.000276339 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGTAAAAG GAAATAAAGA AAAGCAGTCG GTATCACCCT CACGCGCCAG GAGTACTAAG 
ACACAAAAGG AGAGATGGCA ACTTCGGCTA TATGTTGCCG GTAATACGCC AAAGTCTGTA
GCGGCGCTCG CCAACCTTAA ACGCTACTGT GAGGAATATC TTCAGGGCAG ATATGAACTG
GAGGTGATAG ATCTTCTGGT CCAGCCGCAA CTGGCTGCCG GCGATCAGAT ACTTGCGATT
CCTACGCTTG TCAGAAAAGT ACCTGTGCCG GTCAGAAAGA TTATCGGTGA TTTATCTAAT
GAGGAAAAGG TGCTGGTCGG GCTGGATATT AAACCTGTAA AAAGATAG
 
Protein sequence
MVKGNKEKQS VSPSRARSTK TQKERWQLRL YVAGNTPKSV AALANLKRYC EEYLQGRYEL 
EVIDLLVQPQ LAAGDQILAI PTLVRKVPVP VRKIIGDLSN EEKVLVGLDI KPVKR