| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4339 |
|---|
| Symbol | |
|---|
| ID | 8360512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 5397804 |
|---|
| End bp | 5398112 |
|---|
| Gene Length | 309 bp |
|---|
| Protein Length | 102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644966500 |
|---|
| Product | KaiB domain protein |
|---|
| Protein accession | YP_003123988 |
|---|
| Protein GI | 256423335 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.42541 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.000274688 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCACATC AGGGAAAAAA AGACAGAGAA GATGCGGATA CATCTGAATA CGTGCTGCGG
TTGTTTATTA CAGGCAGTAC GCCCAATTCA ATAAGGGCGG TCTCAAATAT TCGTCAGATA
TGCGAAACAT ATCTAAAGGG AAGGTATTCC CTGGAAATCA TTGATGTCTA TCAGGAACCT
GCTTTAGCTC AGCAAGAACA AATTATTGCT TTACCATTGT TAATTAAGAA GCTGCCTCTG
CCGCAAAGAA AATTAATTGG TGACCTTTCA GAAAGTGATA AAATATTAAA AATACTTGAC
GTGATTTAG
|
|---|
| Protein sequence | MAHQGKKDRE DADTSEYVLR LFITGSTPNS IRAVSNIRQI CETYLKGRYS LEIIDVYQEP
ALAQQEQIIA LPLLIKKLPL PQRKLIGDLS ESDKILKILD VI
|
|---|
| |