| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4320 |
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| Symbol | |
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| ID | 8360493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5378184 |
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| End bp | 5378984 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644966481 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003123969 |
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| Protein GI | 256423316 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.146439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0308076 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA CAATATTTGT TACGGGCGCT TCGACAGGCA TAGGCAGAGC TACAGTTATA
TACTTCGCAG AAAAGGGCTG GCAGGTAGTA GCGACAATGC GCAGACCGGA AAATGAAAAA
GAACTGCATT TACTGGACAA CGTAACTATT TTACCACTGG ATGTTACTGA CACCCTGCAG
ATAAAAGAGA CGGTAGAGAA AACGCTGGCA CTTGGACCTG TAGATGTGGT ATTTAATAAT
GCAGGTTATA CGCTGTTAGG GGCATTAGAA GCGATTACAG ATGAGCAACT GGTACAGCAG
ATGGAGACTA ATTTCTTTGG GGTGGTAAGA GTTACCCAGG CGTTTATTCC TTATTTCAGG
GAGCGGAAAG CAGGTCTTTT CATCACTACA ACGTCTAGTG CAGGTCTTGC GGGCTTCCCG
GTAAGTTCGA TGTACGATGC CAGTAAGTGG GCGCTGGAGG GCTGGAGCGA AAGTCTGTCT
TACGAATTGA ATGCATTTGG GATTGGTATC AAGAATATAG AACCAGGGCT CGTTGCTACG
GATAATGGCA AAAGTGCTGT GATTGCATCT CATCCGGCCT ATGAAACCCT GTTAAATAAA
TTTCTGGCCG CGATCAGCAC AGGTACCAAT GTCTCAACTG CTGACGACAT TGCTGCTGTG
GTGTACGAAG CCGCTACTGA CGGAAAGAAC AATCTTCGCT ATGTATGCGG TGAAGACGCG
AAGGCACTGT ATGCACATAG GCTTGCCGTA GGTGACGAAG GTTTCAGAGA TTACGTGCAT
CAGTTAATGG TACAGGGATA A
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| Protein sequence | MKKTIFVTGA STGIGRATVI YFAEKGWQVV ATMRRPENEK ELHLLDNVTI LPLDVTDTLQ
IKETVEKTLA LGPVDVVFNN AGYTLLGALE AITDEQLVQQ METNFFGVVR VTQAFIPYFR
ERKAGLFITT TSSAGLAGFP VSSMYDASKW ALEGWSESLS YELNAFGIGI KNIEPGLVAT
DNGKSAVIAS HPAYETLLNK FLAAISTGTN VSTADDIAAV VYEAATDGKN NLRYVCGEDA
KALYAHRLAV GDEGFRDYVH QLMVQG
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