Gene Cpin_4253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4253 
Symbol 
ID8360426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5315490 
End bp5315984 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content44% 
IMG OID644966419 
Producthypothetical protein 
Protein accessionYP_003123907 
Protein GI256423254 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCAC AGTTTAAGAC AAATGCAGTT ATAAAATCTT CAAGTAGTTA TATTTTATTC 
TCCGCCCCTG ATGGTTTATT TGTAGTCTTA AAACTATCAA ACATGAGAAT AACAACGATT
GACCATAAAG GTCTGAAAGA AACCGCCTGT AACATTCCGC CCAACACCCC TGTAGTGATG
CTGAACCTGT TGCGCTTCAA GCCGGACGGT GGCCGCGAGA TCTATTACCA GCAATATATT
CCTTCCTTCC AGGAATTGAC AACGAAGCTG CAGCTGGAAG GTATCAAACT CGCGTGGGGA
GGCAATGTAT CAGGCAGACT GGCCATAGCA GATAATGAGT GGTGGGACGA TGTATTACTG
GTAGAATATC CTGACTTTGC CAGCTTCCTT TTGATAGCGG AGAGTGATGG TTACAGAAAT
GATGCAGAAC CCTTCCGCTT GGCTGCAATA GACGATTGCA GACTGATACC GATGGTGGGA
TTCATGAAAG AATGA
 
Protein sequence
MTAQFKTNAV IKSSSSYILF SAPDGLFVVL KLSNMRITTI DHKGLKETAC NIPPNTPVVM 
LNLLRFKPDG GREIYYQQYI PSFQELTTKL QLEGIKLAWG GNVSGRLAIA DNEWWDDVLL
VEYPDFASFL LIAESDGYRN DAEPFRLAAI DDCRLIPMVG FMKE