Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4205 |
Symbol | |
ID | 8360379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5255647 |
End bp | 5257224 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644966375 |
Product | resolvase domain protein |
Protein accession | YP_003123863 |
Protein GI | 256423210 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAATC AAAGAAAAGC ATTTCTATAT CCAAGAGTAA GCACAGACGA GCAAGCTGAC GGTTATAGCT TGGCCCATCA AGAGGAAGTA TTAATACGTT ATTGTGAGAA AGAGAATGTA CAGGTAGTTG GCATTTACAG GGAAGACCAT TCGGCAAAGA CGTTTGACAG GCCGGAGTTT CAGAAGATGC TGCATGTAAT CAGCAAAAAC AAAGGCATTG TTGATCTGAT ATTATTTTCT AAATGGGATC GCTTCTCCCG AAATGTCGCC GCTGCCTACG AAATGATCGG TAAGCTGAAA AGGCTATCTG TAGAACCTCA GTCCATCGAA CAGCCTTTGG ACATGGATAT ACCAGAAAGC AAGATCATGC TGGCAATCTA TCTTACTACA CCGGAGGTAG AAAATGACCG GAGAGCCCTA AATACACTTC ACGGTATGCG GAGAGCAAAG AAAGAGGGAA GATACCTGGG TATTGCCCCA ATTGGCTATA AGAATGGACG GGACGCCCAG AACAAGCCCT TCCTTATCCC CAATGAAAAG GCAGAGACAG TCCGTTGGGC GTTCGAAGAG CTATCCAGGG GTATATGGGA TATTGATACA CTAAGGCGTA TGGCAAATAG AAAGGGACTA AAAATAGGTC GTAGCCAGTT CTGGAGCCTC GTCCGTAATC CTGTTTATTG CGGGAAAGTC TTTATAGCTG CCTATAAGAA CGAACCCGCT CATTGTGTAA AAGGTATCCA TGAGCCTATC ATCCCCGAAG GTCTATTTGA CGATGTTCAG GACGTGCTAA AAGGGAAGAA GCGGAATGTC AGGGTCAATA CCTTCACAGA AATTGATCAG CAACTCCCTC TAAGAGGTTT CCTAATATGC CCTCGCTGCG GAAGACTATT AAGTGGGAGT GGATCAAAAG GTAACGGCGG TATCTATTAC TACTACCACT GCCAATCCGT AAAGTTTTGT AAAGAGCGTT TTCGGGCAGA TACCGCTAAC GAGGCATTTG TTAGACAGTT ATGCCAGATA GCAGTCAATG CACCTATCAT CGACTATTAT TGTCAGCTTA TCAGTAATTC ACTAAAGAAG GATAACCAGG GGAAGGAGCA GGAGCTAAAA GAAACACAGG CTGAAATAGA CAAGCTCTAT ACAAGAATAC AAAACGCCCG TTCTTTGCGC CTGGACGATG AATTTACCGC AGAAGAATTT AAAGAGATTA AGACAGACCT TACCAAGAAG ATAGAAGACC TGGAAAAGAA GAAGACTAAA TTAATATCCA CCAACGACAA CTACCAGGAA TACCTTTCCC AAGGCGGCGA AATCATAAAG AATATTGCTA ATCGCTATAT CACAGCTTCC CCAATAGGCA AAAAACAAAT CATTGGTTCG ATCTTCGCAG AAAAGCTGAT TTTTTCAGAA AACAAATTTC GAACCACAGA ACCAAACGTC ATCCTCGAGC TGATAAGCAG GCCCAGAGCG GGCTCCGACG ACTATAAAAA GCAAAAGGTC GGAGACTTTT CCGACCTTTC CGCTTTTGTG CCCAGAACAG GAATCGAACC TGCACACCAC AGGGGAACTG CATTCTAA
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Protein sequence | MINQRKAFLY PRVSTDEQAD GYSLAHQEEV LIRYCEKENV QVVGIYREDH SAKTFDRPEF QKMLHVISKN KGIVDLILFS KWDRFSRNVA AAYEMIGKLK RLSVEPQSIE QPLDMDIPES KIMLAIYLTT PEVENDRRAL NTLHGMRRAK KEGRYLGIAP IGYKNGRDAQ NKPFLIPNEK AETVRWAFEE LSRGIWDIDT LRRMANRKGL KIGRSQFWSL VRNPVYCGKV FIAAYKNEPA HCVKGIHEPI IPEGLFDDVQ DVLKGKKRNV RVNTFTEIDQ QLPLRGFLIC PRCGRLLSGS GSKGNGGIYY YYHCQSVKFC KERFRADTAN EAFVRQLCQI AVNAPIIDYY CQLISNSLKK DNQGKEQELK ETQAEIDKLY TRIQNARSLR LDDEFTAEEF KEIKTDLTKK IEDLEKKKTK LISTNDNYQE YLSQGGEIIK NIANRYITAS PIGKKQIIGS IFAEKLIFSE NKFRTTEPNV ILELISRPRA GSDDYKKQKV GDFSDLSAFV PRTGIEPAHH RGTAF
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