Gene Cpin_4205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4205 
Symbol 
ID8360379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5255647 
End bp5257224 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content44% 
IMG OID644966375 
Productresolvase domain protein 
Protein accessionYP_003123863 
Protein GI256423210 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAATC AAAGAAAAGC ATTTCTATAT CCAAGAGTAA GCACAGACGA GCAAGCTGAC 
GGTTATAGCT TGGCCCATCA AGAGGAAGTA TTAATACGTT ATTGTGAGAA AGAGAATGTA
CAGGTAGTTG GCATTTACAG GGAAGACCAT TCGGCAAAGA CGTTTGACAG GCCGGAGTTT
CAGAAGATGC TGCATGTAAT CAGCAAAAAC AAAGGCATTG TTGATCTGAT ATTATTTTCT
AAATGGGATC GCTTCTCCCG AAATGTCGCC GCTGCCTACG AAATGATCGG TAAGCTGAAA
AGGCTATCTG TAGAACCTCA GTCCATCGAA CAGCCTTTGG ACATGGATAT ACCAGAAAGC
AAGATCATGC TGGCAATCTA TCTTACTACA CCGGAGGTAG AAAATGACCG GAGAGCCCTA
AATACACTTC ACGGTATGCG GAGAGCAAAG AAAGAGGGAA GATACCTGGG TATTGCCCCA
ATTGGCTATA AGAATGGACG GGACGCCCAG AACAAGCCCT TCCTTATCCC CAATGAAAAG
GCAGAGACAG TCCGTTGGGC GTTCGAAGAG CTATCCAGGG GTATATGGGA TATTGATACA
CTAAGGCGTA TGGCAAATAG AAAGGGACTA AAAATAGGTC GTAGCCAGTT CTGGAGCCTC
GTCCGTAATC CTGTTTATTG CGGGAAAGTC TTTATAGCTG CCTATAAGAA CGAACCCGCT
CATTGTGTAA AAGGTATCCA TGAGCCTATC ATCCCCGAAG GTCTATTTGA CGATGTTCAG
GACGTGCTAA AAGGGAAGAA GCGGAATGTC AGGGTCAATA CCTTCACAGA AATTGATCAG
CAACTCCCTC TAAGAGGTTT CCTAATATGC CCTCGCTGCG GAAGACTATT AAGTGGGAGT
GGATCAAAAG GTAACGGCGG TATCTATTAC TACTACCACT GCCAATCCGT AAAGTTTTGT
AAAGAGCGTT TTCGGGCAGA TACCGCTAAC GAGGCATTTG TTAGACAGTT ATGCCAGATA
GCAGTCAATG CACCTATCAT CGACTATTAT TGTCAGCTTA TCAGTAATTC ACTAAAGAAG
GATAACCAGG GGAAGGAGCA GGAGCTAAAA GAAACACAGG CTGAAATAGA CAAGCTCTAT
ACAAGAATAC AAAACGCCCG TTCTTTGCGC CTGGACGATG AATTTACCGC AGAAGAATTT
AAAGAGATTA AGACAGACCT TACCAAGAAG ATAGAAGACC TGGAAAAGAA GAAGACTAAA
TTAATATCCA CCAACGACAA CTACCAGGAA TACCTTTCCC AAGGCGGCGA AATCATAAAG
AATATTGCTA ATCGCTATAT CACAGCTTCC CCAATAGGCA AAAAACAAAT CATTGGTTCG
ATCTTCGCAG AAAAGCTGAT TTTTTCAGAA AACAAATTTC GAACCACAGA ACCAAACGTC
ATCCTCGAGC TGATAAGCAG GCCCAGAGCG GGCTCCGACG ACTATAAAAA GCAAAAGGTC
GGAGACTTTT CCGACCTTTC CGCTTTTGTG CCCAGAACAG GAATCGAACC TGCACACCAC
AGGGGAACTG CATTCTAA
 
Protein sequence
MINQRKAFLY PRVSTDEQAD GYSLAHQEEV LIRYCEKENV QVVGIYREDH SAKTFDRPEF 
QKMLHVISKN KGIVDLILFS KWDRFSRNVA AAYEMIGKLK RLSVEPQSIE QPLDMDIPES
KIMLAIYLTT PEVENDRRAL NTLHGMRRAK KEGRYLGIAP IGYKNGRDAQ NKPFLIPNEK
AETVRWAFEE LSRGIWDIDT LRRMANRKGL KIGRSQFWSL VRNPVYCGKV FIAAYKNEPA
HCVKGIHEPI IPEGLFDDVQ DVLKGKKRNV RVNTFTEIDQ QLPLRGFLIC PRCGRLLSGS
GSKGNGGIYY YYHCQSVKFC KERFRADTAN EAFVRQLCQI AVNAPIIDYY CQLISNSLKK
DNQGKEQELK ETQAEIDKLY TRIQNARSLR LDDEFTAEEF KEIKTDLTKK IEDLEKKKTK
LISTNDNYQE YLSQGGEIIK NIANRYITAS PIGKKQIIGS IFAEKLIFSE NKFRTTEPNV
ILELISRPRA GSDDYKKQKV GDFSDLSAFV PRTGIEPAHH RGTAF