| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4169 |
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| Symbol | |
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| ID | 8360342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5208195 |
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| End bp | 5209532 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644966338 |
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| Product | type I phosphodiesterase/nucleotide pyrophosphatase |
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| Protein accession | YP_003123827 |
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| Protein GI | 256423174 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0770281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00388008 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCGTT TCTATGCAAT CGCGGGCGGA CTGCTGTTAA CATTGTCAGC CGCCGCACAA
AAGGTAAACC ACGTAGTACT GATCACTATT GACGGATTCC GTCCCGACTT CTACCAGGAC
GCCTCCTGGG GAATGAACAA CCTTCGTATG ATGAAGGACA GCGGTGTATC AGCAGATGGC
GTAAACTGTG TATTCCCGAG TGTTACATAT CCGGATCACA CGACGATTAT TACCGGGGTA
AAACCAGCCA AACACGGTAT CTATTACAAT GCGCCTTTTG AAGAGGGGAA AGCCAGCGGC
AAATGGTACT GGTATTATAA CGCGATCAAG GTACCAACAC TGTACGACGC CGTACATGCA
GCTGGTAAAA CCAACGCGAA CGTAATCTGG CCGGTATCTG TAGGCGCACC GGTAGATTAC
AATATTCCGG ATGTATGGCC CCTGGGCAAA AAAACGGACA GGAGAGACGC CACCGCTGCC
GCAACAACAC CAGCGTCTCT GTGGCAGGAA ATACAGAACA ATGCCACCGG AAAGCTGGGT
CCTGAAGATT TCACCATGGT CAGGGAAGAA CTGGTAATGG ACGAAAACGT AGCCAGAATG
GGCGCTTATA TCATCACTAA ATACAAACCC GCTTTTACGA CCTTACACCT GGCCTGCGCT
GACCACTATG AGCATATGCA GGGCAGAGAT GGTTTGCTGG TAAGAAAAGC CGTAAGTGGT
GCAGACAGGG CAATCGGTAC GATACTGGAA GCGCTGATCA GAGCCGGTAT CAAAGACAGT
ACGGCTGTTA TCGTTACAGG CGACCACGGA TTTGTAAATA TTAAACAGTC ATTTTCTCCG
AACGTATTAC TTGCTGAAGC AGGACTGATT AAAGACATCG ATAAGGCAGA CTGGAAAGCG
CGTTTCCATG CCTCCGGCGG TTCTGCATTC CTGCATCTGA AAGATAAGAA CGACAAACAG
TCACTGGAGA AAGTAAAAGA AATACTCGCA CATCTGCCAG CCGATCAACA GCAATTATTC
AGGGTGATCG ATCGTAAACA GCTGGATGCA ATCGGTGCAG ATCCCAATGC GGTACTGGCA
TTGGCTGCTG TTCCGGGTGT AACAATCGGA GGCGCTGTAA AAGGTGCAGT ACTGAAAGAT
GCAAAAGGTG GAACACACGG TTACTACCCT GATTTCCATG AAATACAGAC CGGTTTTGTA
GCATATGGGC CTGGTATTGC AAAAGGAAAT AACCTGAAGG AAATGGACCT GACGGATGTA
GCGCCGCTGA TTGCAAAACT GCTTGGCTTA CAGTTTAACA CGGCCGACGG AAAAGTGCCT
GCCGGCGTAC TGAAATAA
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| Protein sequence | MKRFYAIAGG LLLTLSAAAQ KVNHVVLITI DGFRPDFYQD ASWGMNNLRM MKDSGVSADG
VNCVFPSVTY PDHTTIITGV KPAKHGIYYN APFEEGKASG KWYWYYNAIK VPTLYDAVHA
AGKTNANVIW PVSVGAPVDY NIPDVWPLGK KTDRRDATAA ATTPASLWQE IQNNATGKLG
PEDFTMVREE LVMDENVARM GAYIITKYKP AFTTLHLACA DHYEHMQGRD GLLVRKAVSG
ADRAIGTILE ALIRAGIKDS TAVIVTGDHG FVNIKQSFSP NVLLAEAGLI KDIDKADWKA
RFHASGGSAF LHLKDKNDKQ SLEKVKEILA HLPADQQQLF RVIDRKQLDA IGADPNAVLA
LAAVPGVTIG GAVKGAVLKD AKGGTHGYYP DFHEIQTGFV AYGPGIAKGN NLKEMDLTDV
APLIAKLLGL QFNTADGKVP AGVLK
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