Gene Cpin_4168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4168 
Symbol 
ID8360341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5207689 
End bp5208111 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content48% 
IMG OID644966337 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_003123826 
Protein GI256423173 
COG category[S] Function unknown 
COG ID[COG2764] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0156126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00300436 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTTCAT TGAATCCTTA CCTGCTTTTT AATGGTACCT GCGAGGAAGC GTTCAACCTT 
TACAAGTCTG TGTTTGGAGG AGAATTCCAA ATGATATCCA AGTTCAAAGA CATGCCCGGA
GAAGGGGTCG ATCCAAAGTA TGCCGAGCAT ATCATGCATG TTGCATTACC TGTGGGGGGT
AAAGACATCC TGATGGGCAG TGATTGCGGT CCGGAGAGTG CCAATATTCG GATTGGTACT
AACTTTTCCG TAGCCATCTC AACGGCTTCC GAAGAAGAAA CCAGGAAGAT CTTCGACGGA
CTGGCAGCCG GCGGTAAAGT CACTATGCCG CTGGATAAGA CTTTCTGGGC CCCTTTGTTT
GGTATGGTTA CCGACAAATT CGACATCAAC TGGATGGTGA GTTTTGACGT ACAACCCCAG
TAA
 
Protein sequence
MASLNPYLLF NGTCEEAFNL YKSVFGGEFQ MISKFKDMPG EGVDPKYAEH IMHVALPVGG 
KDILMGSDCG PESANIRIGT NFSVAISTAS EEETRKIFDG LAAGGKVTMP LDKTFWAPLF
GMVTDKFDIN WMVSFDVQPQ