Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4168 |
Symbol | |
ID | 8360341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5207689 |
End bp | 5208111 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644966337 |
Product | 3-demethylubiquinone-9 3-methyltransferase |
Protein accession | YP_003123826 |
Protein GI | 256423173 |
COG category | [S] Function unknown |
COG ID | [COG2764] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0156126 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00300436 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTTCAT TGAATCCTTA CCTGCTTTTT AATGGTACCT GCGAGGAAGC GTTCAACCTT TACAAGTCTG TGTTTGGAGG AGAATTCCAA ATGATATCCA AGTTCAAAGA CATGCCCGGA GAAGGGGTCG ATCCAAAGTA TGCCGAGCAT ATCATGCATG TTGCATTACC TGTGGGGGGT AAAGACATCC TGATGGGCAG TGATTGCGGT CCGGAGAGTG CCAATATTCG GATTGGTACT AACTTTTCCG TAGCCATCTC AACGGCTTCC GAAGAAGAAA CCAGGAAGAT CTTCGACGGA CTGGCAGCCG GCGGTAAAGT CACTATGCCG CTGGATAAGA CTTTCTGGGC CCCTTTGTTT GGTATGGTTA CCGACAAATT CGACATCAAC TGGATGGTGA GTTTTGACGT ACAACCCCAG TAA
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Protein sequence | MASLNPYLLF NGTCEEAFNL YKSVFGGEFQ MISKFKDMPG EGVDPKYAEH IMHVALPVGG KDILMGSDCG PESANIRIGT NFSVAISTAS EEETRKIFDG LAAGGKVTMP LDKTFWAPLF GMVTDKFDIN WMVSFDVQPQ
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