Gene Cpin_4157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4157 
Symbol 
ID8360330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5186348 
End bp5186812 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content46% 
IMG OID644966327 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003123816 
Protein GI256423163 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.279013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.182445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGA CTCAAACATT AAGTACCGGC GATCGTATTC CTGATTTCAG TTTACAGGAC 
GAGAACGGCC AGCTATTTAA TATTCGCGAC TACGTCGGCA AGAAAAAGCT CGTTATCTAT
TTCTACCCGA AAGATGAAAG CGCTGTCTGC ACAAAAGAAG CCTGCTCATT CCGGGATAGT
TATGCCGATT TTACAGATGC CGGCGCTATC GTGATCGGTA TTAACGCCGG TAGCGTGGAA
AGCCACCGTT CCTTTAAGGA GCATCACCGA TTACCATTTA CGCTGCTGAG CGATCCGGGC
AATAAGCTGC TGAAACAATT CGGTGTCAAA AATGTACTGT TCCTGACGGG TAGAGAAACA
TTCCTCGTAG GACTGGACGG AAAGATTGAA GCCAGTTTCA GAGGCTTTCT GAAAGGAGAT
GCACATGCAG AAAAAATGCT GGCGATGTTG CGTGTTAATG TTTAG
 
Protein sequence
MATTQTLSTG DRIPDFSLQD ENGQLFNIRD YVGKKKLVIY FYPKDESAVC TKEACSFRDS 
YADFTDAGAI VIGINAGSVE SHRSFKEHHR LPFTLLSDPG NKLLKQFGVK NVLFLTGRET
FLVGLDGKIE ASFRGFLKGD AHAEKMLAML RVNV