| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4147 |
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| Symbol | |
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| ID | 8360320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5174052 |
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| End bp | 5175368 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644966318 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003123807 |
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| Protein GI | 256423154 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0286987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.311664 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGGTA CTGGTTTTCA TCAAGATAAC ATTGTGATAA CATTGTTTTT ATATTTTAGC
AACACGAGCA CACATATGAT CTATGTTATT GCAATAGGGA CTTTCCAGGC ATTTACAGCC
GTTCTATTAC TATGGACGAA CAGATTGAAA AGTAAGGCGG ACGCTTTGCT TATTTTGCTG
TTGTTATGTA TTGCCGCCCA TCTGGCGACA AAATTCTATA TCTATACTGT TGTCAGTGAT
GCGCATATCC GGTTACAGAT GAACACCTTC ATTGGTTTCT GTTATGGTCC GCTGCTTTAT
CTATATACAC TTAAAAATAA AGATGAATCG TTCATTCCTG CGTCGCGTTG GTATGTGTTC
ATTCCGTTTA TATTAGGTGC GATCGGTTAT CTGACTGTCG TATGTGTACT GGAATTCTCT
TTACAGGCGG GATATGCGGC TTTGCTGGTC TATAATCAGA TTTCGACCTG GACGATGTTA
GCTGCCGGCG CGTTTTTTCC TATGCTGACG CTCCGGGTCG CGCGAAAAAA TCTGCGCAAT
AAACCACAGG AGTTACAGCT GATAGAATGG ATCTCTTATT GTTTGTTAGC GATCACCGTT
GTTTCACTTA TTTTTCAGGG TATCAATGCA TTGCACCTGT TAGGATATCA GGACCAGATC
TTTTGCAGGG ACATTATATA TTCGATCCTG CTGGTGGTGT GTTTTATCAT TATCCGTTAT
AAATATGTGG CAGTCGTTCC GCCGGCGATG TATGTGGAAA CAGTTGTAAT ACCAGCCATT
CAGGAAGAGA TACCTGCAGA GAAGGCAAAT GTGATCGATA TACCGGAAGC TGTAATGGAA
ATTGAACCAT TACCGGCGCA TGTTGCGATA GTACAGGATT CGGCGATAGA CGATGAAGAT
ATCAGTGCAC AGTCCTCTCC TGTTCGCAGA ACCCAATTGT CGATTACCGA GCATCGTGAG
ATCATGGATA AGCTGGAACA ACACCTGCAA CGAACAAGGA TATTTACGGA TGCGGATCTG
AATATGGATA AACTGGCGGG TTCCGTTGGC ATCAGCAAAT ACCATCTTTC CGAAGCGTTG
AATTCCTATG CTTCCAAAAG CTTTTATCAG TTTATTAATG AAATGCGCAT CGAACGAGCT
ATCCAACAGA TGCAGTTTAT GAGTAGCAGA GCGCTTCCTG TAAATGTACT GACCCTCGCT
TTTGATTGCG GCTTCAAGGC CAAGTCTTCG TTTAATCAGT ATTTTAAGAA AATAACGGGG
CTGACGCCCA CGGCATACCT CCGTTCCGTC GCCGAGATGC GGACTGAAAC ATTGTAA
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| Protein sequence | MFGTGFHQDN IVITLFLYFS NTSTHMIYVI AIGTFQAFTA VLLLWTNRLK SKADALLILL
LLCIAAHLAT KFYIYTVVSD AHIRLQMNTF IGFCYGPLLY LYTLKNKDES FIPASRWYVF
IPFILGAIGY LTVVCVLEFS LQAGYAALLV YNQISTWTML AAGAFFPMLT LRVARKNLRN
KPQELQLIEW ISYCLLAITV VSLIFQGINA LHLLGYQDQI FCRDIIYSIL LVVCFIIIRY
KYVAVVPPAM YVETVVIPAI QEEIPAEKAN VIDIPEAVME IEPLPAHVAI VQDSAIDDED
ISAQSSPVRR TQLSITEHRE IMDKLEQHLQ RTRIFTDADL NMDKLAGSVG ISKYHLSEAL
NSYASKSFYQ FINEMRIERA IQQMQFMSSR ALPVNVLTLA FDCGFKAKSS FNQYFKKITG
LTPTAYLRSV AEMRTETL
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