Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4062 |
Symbol | |
ID | 8360235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5052061 |
End bp | 5053338 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644966234 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_003123723 |
Protein GI | 256423070 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
TIGRFAM ID | [TIGR00831] Na+/H+ antiporter, bacterial form |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000359855 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.100381 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAATT ACAGCGTCGT TATTCTGATC CTGGCTATTA TGATCGGTCT GTCAGCTATT GCAGACAAGA TCCGTCTGCC TTATCCTATA TTGCTGATTA CAGCAGGTAT CGCTGTTGGA TTTATTCCAA CAATGCCGGT CATCGAACTG AACCCGGAAA TCATTTTCCT GATCTTTTTA CCGCCCTTAT TGTATGATGC GGCATTTAAT ATGCCTGCCA ACGAGTTCCG GACGCATTTT AATACCATCA CCTCCCTGGC CGTCGGGCTG GTGTTTATTA CCACCGTCGG GATTGCTGTT ATTGCCTATT ATATCATTCC AGGTATGACC TGGCCGCTGG CATTTGTACT CGGTGCGATC CTCTCAGCAA CAGATGCCGT AGCTGCGATC GGTATTACAA AAGGGCTGGG ATTGTCGCAT AAAACAACGA CGATCCTGGA AGGAGAAAGC CTGGTGAACG ATGCCTCTGC ACTGGTCGCT TATCGTTTTG CCGTAGCAGC TGTGACAGGA ACTGCCTTTG TATTCTGGCA GGCATCTTTA CAATTTGCCA TTCTGTTGGC CGGAGGTTTT GCAGTAGGCT TTGTGATCGG TAAACTACTG TCGTTTATAC TTGCGCGTAT ACATGGGAAT GTAATGGTCA CTATCAGTTT TATGCTGCTG ATGCCTTTTG TGGCTTACCG GATTGCGGAG GAGCTGCATG TCTCCGGTGT CATCGCTGTG GTGGTACTGG GCCTGAGTAT TTCCCGTTTC AGTAAAAAGA TTTTCCCGGA TGGTCTGAAG GATCAATCCA AGACAATCTG GGATGTGATC ATCTTCCTGC TGAATGGTTT GATCTTTATC CTGATCGGAT TACAATATCC TTATGTATTA AAACACATAG ACAAAACGCA GGTGCTCCCA TATCTGGGAT ACGCGTTCCT GATTACAATC GTCGCACTGG TACTTCGTAT GGCGAGAGTA TTTCTGCAGA AGGTCAATCT GCAAAGGGCA TTTTTGTCCT CAAAACATCG CAGACGCCAT AAGATGACAA GGGATACTTT GCTTGACTAT CCTACCAGCG TGATAATCAG CTGGTCCGGT ATGCGTGGTA TTGTATCATT GGCCATCGCA ATCGGTCTTC CGGACACGCT TGAAAACGGC GCACCTTTCC CCTTGAGGAA TGAGATCATC TTTATATCGG TAGCGGTAGT ATTATTTACA CTAATAGGTC AGGGGCTTAG CCTGCCCTGG ATCGTGAAGA TGATGAGTAG ATATAAGCGT CAGAATAAGC TGAGCTGA
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Protein sequence | MENYSVVILI LAIMIGLSAI ADKIRLPYPI LLITAGIAVG FIPTMPVIEL NPEIIFLIFL PPLLYDAAFN MPANEFRTHF NTITSLAVGL VFITTVGIAV IAYYIIPGMT WPLAFVLGAI LSATDAVAAI GITKGLGLSH KTTTILEGES LVNDASALVA YRFAVAAVTG TAFVFWQASL QFAILLAGGF AVGFVIGKLL SFILARIHGN VMVTISFMLL MPFVAYRIAE ELHVSGVIAV VVLGLSISRF SKKIFPDGLK DQSKTIWDVI IFLLNGLIFI LIGLQYPYVL KHIDKTQVLP YLGYAFLITI VALVLRMARV FLQKVNLQRA FLSSKHRRRH KMTRDTLLDY PTSVIISWSG MRGIVSLAIA IGLPDTLENG APFPLRNEII FISVAVVLFT LIGQGLSLPW IVKMMSRYKR QNKLS
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