| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4054 |
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| Symbol | |
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| ID | 8360227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5042263 |
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| End bp | 5043192 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644966226 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_003123715 |
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| Protein GI | 256423062 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0278904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0935667 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTAATTC ATGTGAAAAC TGATACTGTG CAAGACAAAC CAGATAACAC AAAGCTCTGG
CTATTTCTGT TTGCTGTGTA TATTATCTGG GGATCTACCT ACCTGGGGAT GAAAATCGCC
ACGGAGGTAG TACCCCCTTT TTTATTATCT GCCTTTCGCT TTCTGGCTGC CGGGACAATT
CTGGGACTGA TCAGTCGAGG GAGTGAGCGG CAATGGCCGA CAAAACAACA GGTAGGATCT
GCTGCGTTCG TCGGATTGAT GCTGATCGGT ATCGGTAATT CCTGTACGGC GCTGGCGGTG
CATTATATGC CATCCGGATT GGTTGCATTG ATTGTGGCGG CTATCCCGGT GTGGTTTGTA
GGATTTGACT GGGCCTTTTT CTCTAAACAA CGCCCTACGA TTATGACGTT TACGGGTATC
CTCGTGGGAT TGGTGGGATT GTTCCTCTTA TTCAACCCTT TCGGAGCAGA TCATCAGAGC
CGTCCCTATC CCTTATGGCC TATCGCGGTT TTGGCAGGAG GTTGTGCCTG TTGGGCGCTG
GGTTCCTTAT CGGTATCTAA ATTATCCATG CCGGCGCCGA TGACGTCGGC CGCTTTGCAG
ATGCTGACAG GTTCGGTATT TTGCTTTATC GTTAGTTCGG TGATGGAACC CGGCGCCTGG
AATACACTGG CACATCTGAG TACGCGGACC ATCAGCGCTT ACCTTTATCT GGTGTTTATT
GGTTCGCTGG TAGGTTTTAC CTCTTACAGC TGGCTAACGC GTAATGCGCC GCCGGGATTA
TTATCGACGT ATGCGTATGT AAACCCGGTA GTGGCTTTAT TCTTAGGATG GGCGATCGGC
CATGAAAATT TAACTTCACA GGCACTGATG GCCTGCGGAA TTGTAATCGG AGGTGTGGTA
CTGATGACCT TAGGTAAACG GAAGGGCTAA
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| Protein sequence | MLIHVKTDTV QDKPDNTKLW LFLFAVYIIW GSTYLGMKIA TEVVPPFLLS AFRFLAAGTI
LGLISRGSER QWPTKQQVGS AAFVGLMLIG IGNSCTALAV HYMPSGLVAL IVAAIPVWFV
GFDWAFFSKQ RPTIMTFTGI LVGLVGLFLL FNPFGADHQS RPYPLWPIAV LAGGCACWAL
GSLSVSKLSM PAPMTSAALQ MLTGSVFCFI VSSVMEPGAW NTLAHLSTRT ISAYLYLVFI
GSLVGFTSYS WLTRNAPPGL LSTYAYVNPV VALFLGWAIG HENLTSQALM ACGIVIGGVV
LMTLGKRKG
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