| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4041 |
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| Symbol | |
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| ID | 8360214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5027338 |
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| End bp | 5028969 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966214 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003123703 |
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| Protein GI | 256423050 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.457031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.172562 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAAGA GACTATTCTG CATACCGTTT ATCGTATTAG TGGCTGCCTG CGGACGTCCC
GCTTCTTCCG GCAAACAGGT GTTCCGGTAT AATGTGCCGG AGGGAATTTC CTCCCTGGAT
CCGGCATTTG CCAAAAACCA GGCAATCATC TGGCCGGTCC GACAGCTGTA TAATACCCTG
GTTGAACCGG ATGAACAACT GAATATCCGT CCTTCGCTGG CAAAACGCTG GGATGTCTCT
GCGGATCATA AAACCTTTGT CTTCCATCTA CGTACAGACG TTCATTTCCA TGATAATGAG
ATCTTCCCGG AGGGGAAAGG GCGTTTGATG ACAGCTGCAG ACGTGGTGTA CAGTCTGCGG
CGTATTATGG ATCCCGCCAC CGCATCTCCC GGCGCCTGGA TCTTCAATGG TAAGGTAGAC
CTGGTTAAAG GCTTTCAGGC GGTCAATGAT TCCACCTTTC AGCTGAACTT ATTACAACCT
TTCCATCCTA TACTGGGTAT TCTGAGTATG CAGTACTGCT CCGTTATCCC ACATGAGGCA
GTCGAAAAGT ATGGGAAGGA CTTCCGTAAA CATCCCTGCG GAACGGGTCC TTTCAGTTTC
TCTTTCTGGG AAGAAGGACA AGCCCTCGTA CTGCATCGTA ATCCTCATTA TTTTGAGAGA
GACAGTGCCG GACATGCATT GCCCTACCTG GATGCGGTGA AAGTCAGTTT CCTGGACAGC
AAGGCGACGG AATTCCTATT ATTCCGTCAG GGGCAGCTGG ACTTTATGAA TGATATAGAT
GCGTCGTTTA AAGATGAAGT GCTGACGAAA AAGGGAAAAC TGAAGAAGGA ATGGGAGGGG
AAACTGATCC TTGACAAGAG CCCTTATCTG AATATTGAAT ACTTCGGGTT TTTGCTGGAT
ACCAGCAAAG TAAACGTAAA ACATTCACCC TCAGCAATAA AGAAAATCAG ACAAGCCATC
AACTACAGTA TCGACAGAAT GCGGATGATC ACATATCTGC GTAACGGTAT TGGCTACCCG
GCTACATCCG GATTTGTACC TATGGGATTA CCTTCCTTCG ATACGACCAA GGTAAAAGGC
TTCCGTTATG ATCCTGAAAG GGCGAGATCC TTGCTGAAGG AAGCCGGATT CCCGGAGGGG
AAAGGACTGG CTTCGATCAG GTTACTCTCT ATTCCTGTTT ATGAGGATTA CGCCAATTAT
GTAGCTAATC AGTTGCAGCA GGTCGGTATC CCTGTACAGG TGGAAGTGAT GCAGAAAGCA
CTCCTTCTGG AACAGACCGC AAAGTCGGAA GCGCTGTTTT TCAGAGGTAG CTGGATGGCT
GATTATGCAG ATGCCGAAAA CTACCTCGCT GTGTTTTACA GTAAAAATCC GGCTCCCCCA
AACTATACCC GTTATGTCAA TCCGGCATTC GATAAGCTCT ATGAAAAGTC GCTGAGCGAA
AACAACGATT CGCTTCGTTC GCTCCTTTAT CAGGAGATGG ACCGGATGAT TATTGACGAT
GCTCCTGTCG TTCCATTATT CTATGACGAA GTCATACATC TGGTACAACC CAACGTTGAA
GGGTTTACAA GTAATGCCCT GAATTTGCTT GAACTCCGGA AAGTAAAGAT CCGGCTTTCT
CAACATCCCT GA
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| Protein sequence | MYKRLFCIPF IVLVAACGRP ASSGKQVFRY NVPEGISSLD PAFAKNQAII WPVRQLYNTL
VEPDEQLNIR PSLAKRWDVS ADHKTFVFHL RTDVHFHDNE IFPEGKGRLM TAADVVYSLR
RIMDPATASP GAWIFNGKVD LVKGFQAVND STFQLNLLQP FHPILGILSM QYCSVIPHEA
VEKYGKDFRK HPCGTGPFSF SFWEEGQALV LHRNPHYFER DSAGHALPYL DAVKVSFLDS
KATEFLLFRQ GQLDFMNDID ASFKDEVLTK KGKLKKEWEG KLILDKSPYL NIEYFGFLLD
TSKVNVKHSP SAIKKIRQAI NYSIDRMRMI TYLRNGIGYP ATSGFVPMGL PSFDTTKVKG
FRYDPERARS LLKEAGFPEG KGLASIRLLS IPVYEDYANY VANQLQQVGI PVQVEVMQKA
LLLEQTAKSE ALFFRGSWMA DYADAENYLA VFYSKNPAPP NYTRYVNPAF DKLYEKSLSE
NNDSLRSLLY QEMDRMIIDD APVVPLFYDE VIHLVQPNVE GFTSNALNLL ELRKVKIRLS
QHP
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