| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4033 |
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| Symbol | |
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| ID | 8360206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5017019 |
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| End bp | 5018806 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644966206 |
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| Product | GTP-binding protein LepA |
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| Protein accession | YP_003123695 |
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| Protein GI | 256423042 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0481] Membrane GTPase LepA |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0111915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.336417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAATA TCAGGAATTT TTGCATCATT GCACACATCG ACCACGGTAA AAGTACATTG
GCTGACAGGC TGTTAGAGCA TACAAAGACA ATCTCAGACA GAGAAATGCA GGCTCAGGTA
TTGGATGACA TGGATCTGGA AAGAGAGAAA GGTATCACTA TCAAGAGTCA TGCGATCCAG
ATGAACTATG TTCAGGACGG AACGTCATAT GTATTTAACC TGATCGATAC TCCCGGTCAC
GTGGACTTCT CTTATGAAGT ATCCCGTGCG CTGGCTGCCT GCGAAGGTGC ACTGCTGTTG
GTTGATGCTG CTCAGGGTAT CCAGGCACAA ACTATTTCCA ACCTTTATCT GGCCCTGGAA
AATGACCTGG AGATCATCCC CGTGATCAAC AAGATCGATA TGGACGGCGC TATGATCCCG
GAGGTAAAAG ACCAGATCAT AGAACTGATC GGTTGTAAGG AGGATGAAAT CCTGCTGGCT
TCCGGTAAGA CGGGTATTGG TATCGAAGAG ATCCTGGATG CCATCGTGAA ACGTGTTCCA
GCTCCGAAAG GAGATCCGGA AGCTCCTTTA CAGGCACTGA TCTTTGATAG CGTATTCAAC
TCCTTCCGTG GTATCATCGC TTACTACAGA ATATTTAACG GTACCCTCAA AAAAGGAGAT
AAAGTTAAAT TCTTCAATAC CGATGAAGAA TACTTTGCTG ATGAAGTAGG TATTCTGAAA
CTCGGTCTGC AACCCACCCA AACCGTTAAG ACCGGCGACG TAGGTTACAT TATCACCGGT
ATCAAAAATG CCAAAGAAGT AAAAGTGGGC GATACCATCA CTACCAGCGC GAATCCTAGT
CTGGAGTCTA TCAACGGTTT CGAAGAGGTA AAACCAATGG TATTCGCAGG TATCTTCCCT
GTAAATACAG AAGACTTCGA AGAGCTACGT GACTGTATGG AGAAACTGCA GCTGAACGAT
GCTTCCCTGA CTTTCGAACT GGAAACGTCC CAGGCATTGG GCTTTGGTTT CCGATGCGGA
TTCCTCGGAA TGCTGCACAT GGAGATCATC CAGGAACGTC TCGAAAGAGA GTTCAATCAG
ACTGTGATCA CCACCGTTCC GAACGTAAGC TTTATCGCCC ATACGACCAG AAAGGAAACT
ATTATTGTGA ACAACCCTTC TGAAATGCCG GATCCAAGTA CACTGGAACG CATTGAAGAA
CCGTTCATCA GAGCACAGAT CATTACCAAA CCGGATTATA TTGGTAACAT CATGACCCTG
TGTCTCGGTA AGAGAGGTCT CCTGATGAAT CAAAGCTATC TGACCCCAAC CAGGGTTGAA
CTGATATTTG AAATGCCACT CACAGAGATC GTATTCGATT TCTATGATAA GCTGAAAAGC
CAGACACGTG GTTACGCCTC CTTCGACTAT GCACCGATCG GTTACCGTGA CAGTGACATC
GCGAAGATGG ATATTCTGCT GAACGGCGAC AAGGTGGATG CGCTGAGCGC CCTGATTCAC
CGTGGTCGTG CACAGGACTT CGGTCGTAAA CTCTGTGAAA AGCTGAAGGA ACTGTTGCCT
CGTCAGCAAT TTATGATTGC TATCCAGGCA GCGATCGGCG CCAAGATTCT GGCCCGTGAA
ACGATCAGCG CTATGCGTAA GGATGTTACT GCCAAATGTT ATGGTGGTGA TATCTCCCGT
AAGCGTAAAC TGTTGGAAAA ACAGAAAGAA GGTAAGAAGC GTATGAGACA GATTGGTAAC
GTGGAAGTAC CGCAGGAAGC ATTCCTTGCT GTTCTTAAAT TAGATTAG
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| Protein sequence | MKNIRNFCII AHIDHGKSTL ADRLLEHTKT ISDREMQAQV LDDMDLEREK GITIKSHAIQ
MNYVQDGTSY VFNLIDTPGH VDFSYEVSRA LAACEGALLL VDAAQGIQAQ TISNLYLALE
NDLEIIPVIN KIDMDGAMIP EVKDQIIELI GCKEDEILLA SGKTGIGIEE ILDAIVKRVP
APKGDPEAPL QALIFDSVFN SFRGIIAYYR IFNGTLKKGD KVKFFNTDEE YFADEVGILK
LGLQPTQTVK TGDVGYIITG IKNAKEVKVG DTITTSANPS LESINGFEEV KPMVFAGIFP
VNTEDFEELR DCMEKLQLND ASLTFELETS QALGFGFRCG FLGMLHMEII QERLEREFNQ
TVITTVPNVS FIAHTTRKET IIVNNPSEMP DPSTLERIEE PFIRAQIITK PDYIGNIMTL
CLGKRGLLMN QSYLTPTRVE LIFEMPLTEI VFDFYDKLKS QTRGYASFDY APIGYRDSDI
AKMDILLNGD KVDALSALIH RGRAQDFGRK LCEKLKELLP RQQFMIAIQA AIGAKILARE
TISAMRKDVT AKCYGGDISR KRKLLEKQKE GKKRMRQIGN VEVPQEAFLA VLKLD
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