| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4009 |
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| Symbol | |
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| ID | 8360182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4986865 |
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| End bp | 4989096 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644966183 |
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| Product | Glutamate carboxypeptidase II |
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| Protein accession | YP_003123672 |
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| Protein GI | 256423019 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2234] Predicted aminopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.677524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0030346 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAATCTGA AGACAACTGC CAGCAGTATT GCCTTATTTT TGTTACTACA AAGCTCCTAT
GCACAACAAA AGCTGAGTGG TTTCAGCAGT GAACATGCGC AACAGCAACA GGACCTGGAA
GCCCGTTTCG ACAAAGGACT GAGCGCTGCC GCCATCGGCA ATAATATCAG GACGCTGTCT
GCCAAACAAC ATTATCTCGG TATGCCCCGG GATAAATGGG TCGCTGAGAA TATCCTGCAA
CAATTTAAAA GTTATGGCTG GGATGCCCAC CTGGAAACTT ACCAGGTGCT GTTTCCTACA
CCGAAGACCA GGGTACTGGA AGCCAGCTAT CCTGCAGGCT ATAAAGCGGT ATTGAAGGAA
CCGGCATTGA AGGAAGACGC GAGTACCGGT CAGCCGGATG AACTGCCTAC CTACAATGCC
TGGAGTGCAG ACGGTGATGT AACAGGAGAA CTGGTTTTTG TGAATTATGG TCTGCCGGAA
GACTATGAAT ACCTGGAAAG ACTGGGCATC GATGTAAAAG GGAAAATTGT CATTGCGAAA
TACGGCCGTT CCTGGAGAGG TATAAAACCG AAGGTTGCCC AGGAACATGG CGCAATCGGC
ACCCTGATCT ATTCTGATCC GAAAGATGAC GGGTATTACC AGGGGGATGT ATACCCTGTG
GGTCCTTATA AAAGCGAATA CGGGGTCCAA AGAGGCTCTA TTATGGATAT GGTGATATAT
CCGGGTGATC CTTTGACGCC TGGCGTAGGA GCGACGGAAA ATGCCCAGAG ACTGGAAAGG
TCTGCCGCTA CAAATCTGTT GAAGATCCCG GTATTGCCGA TCAGCTATCA TGACGCTGCT
CCTTTGCTGG CTGCTCTGGA AGGACCAGTC GCTCCTGATG CCTGGAGAGG CGCATTGCCC
TTTACTTACC ATATCGGTCC CGGAAAGGCA AAAGTGCACC TGAAGCTGGA ATTTGACTGG
AAAATGGTGC CTGCGTATAA TGTGATTGCT ACGATGAAAG GAAGTCAGTT TCCGGACCAG
TGGGTGATCA GGGGTAATCA CCATGATGCC TGGGTATATG GCGCAGCCGA TCCGATTAGC
GGACTGTCTT CCCTGCTGGA AGAAGCAAAG GCGATCGGTG AACTGGCAAA GAACGGGTAT
AAGCCGAAGA GAACGCTTGT GTATGCTGCC TGGGATGGCG AAGAGCCGGG TTTGCTGGGT
TCGACTGAAT GGGTGGAAGC ACATGCCGCT GAATTACAAC AGAAAGCAGT CGCTTATATC
AATTCTGATG GTAACAGCCG CGGATTCCTG GGTGTAGGTG GTTCACATGC ACTGGAACCT
TTTATGGGTG AGATTGCTAA AAGTATTACC GATCCGCAGA CGAAAGTCAG CATTTTCGAA
AGAAAACAGG CTTCCGACCT TGTATCTGCT GCTTCAACAA AAGCAAAGAA AGATATCCTG
GCTAAGAAAG ATATGACGAT CAGCGCATTG GGATCAGGGT CTGATTATTC TTCTTTCCTT
CAACACCTGG GTATTCCATC CCTGAATGTG GGTTTTGGCG GAGAAGGCGC CGGTGGTGAA
TACCATTCTA TTTATGACAC TTATGAGAAT TACTCCCGCT TTAAAGATCC GGGATTTGAA
TATGGTGTAG CCTTGTCCCG TCTGGCCGGA CATGCCGCCC TGAGACTGGC TGATGCAGAT
GTACTGCCAT TTGATTTCCG GAGCCTTTCT AAAACGATCA ACGGTTATAC CACTGACCTG
CTCTCCCTGG CAGAACAGAT GCGGGAAAAT ACAGCGGTAG AAAATCAAAT CATCAGTAAT
AATGCCTATC AACTGGCAGG AGATGTAACA AAGCCGTTAA AGGCGCCTGT CGCCAAACCG
GAAGTGCCAT ATATAGATTT TTCGAAGTTG CAGAATGCCC TGGTAGCCCT TGATAAAACG
GCACAGCATT TACAGGATGC CAGGAAACCA CAGTTACCGG CAGCGCAACT GGAGGTACTG
AATAAAGCCC TTTATCAGGC AGAGCAGCAG TTATTGCATG AACAAGGTTT GCCTAACAGG
GCATGGTATA AACACGTGAT TTATGCGCCG GGATTTTATA CGGGGTATGG TGTGAAGACA
ATGCCGGGTA TCCGCGAAGC GATTGAACAG CGTAGATGGA AAGAAGCGGA GGAACAGATT
GGTATTGCAG CGACAGCGAT CAACCGGCTG ACAGACTACC TGGAAAAGAC ATTTAATTCA
ATTAGGAATT AG
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| Protein sequence | MNLKTTASSI ALFLLLQSSY AQQKLSGFSS EHAQQQQDLE ARFDKGLSAA AIGNNIRTLS
AKQHYLGMPR DKWVAENILQ QFKSYGWDAH LETYQVLFPT PKTRVLEASY PAGYKAVLKE
PALKEDASTG QPDELPTYNA WSADGDVTGE LVFVNYGLPE DYEYLERLGI DVKGKIVIAK
YGRSWRGIKP KVAQEHGAIG TLIYSDPKDD GYYQGDVYPV GPYKSEYGVQ RGSIMDMVIY
PGDPLTPGVG ATENAQRLER SAATNLLKIP VLPISYHDAA PLLAALEGPV APDAWRGALP
FTYHIGPGKA KVHLKLEFDW KMVPAYNVIA TMKGSQFPDQ WVIRGNHHDA WVYGAADPIS
GLSSLLEEAK AIGELAKNGY KPKRTLVYAA WDGEEPGLLG STEWVEAHAA ELQQKAVAYI
NSDGNSRGFL GVGGSHALEP FMGEIAKSIT DPQTKVSIFE RKQASDLVSA ASTKAKKDIL
AKKDMTISAL GSGSDYSSFL QHLGIPSLNV GFGGEGAGGE YHSIYDTYEN YSRFKDPGFE
YGVALSRLAG HAALRLADAD VLPFDFRSLS KTINGYTTDL LSLAEQMREN TAVENQIISN
NAYQLAGDVT KPLKAPVAKP EVPYIDFSKL QNALVALDKT AQHLQDARKP QLPAAQLEVL
NKALYQAEQQ LLHEQGLPNR AWYKHVIYAP GFYTGYGVKT MPGIREAIEQ RRWKEAEEQI
GIAATAINRL TDYLEKTFNS IRN
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