| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3995 |
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| Symbol | araD |
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| ID | 8360168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4970019 |
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| End bp | 4970720 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644966169 |
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| Product | L-ribulose-5-phosphate 4-epimerase |
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| Protein accession | YP_003123658 |
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| Protein GI | 256423005 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0420304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.534245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAAAC AATATCAGGG CATAAAAGAG CAGGCTTACG AAGCCAATAT GCAATTGCCT
GCACTGGGAC TGGTACTCTT TACATTCGGA AATGTAAGCG TAGTTGACCG TGCTGCCGGC
GTATTTGCCA TAAAACCCAG CGGCGTGCCT TATGTGCAGC TGTCGCCGGA TCAGATGGTG
ATCGTTGACT TTGACGGTAA CACCGTTGAA GGTAACAGCC GCCCCTCCTC GGATACCCAA
ACTCATGCGG TATTATACAA GCACTGGGAT GATATCGGCG GTATCGTACA TACGCATTCC
ACGTATGCAA CTGCCTGGGC ACAGGCACAG CGCGATATCC CTGTTTATGG TACTACGCAC
GCTGATCACC TTACCGCAGA CGTACCCTGT GCAGCGCCTA TGAGTGATGA CATGATCAAG
GGGAATTATG AATACCAAAC CGGTTTTCAG ATCATGCAAT GCCTGCAGGA AAGAGGTCTT
TCCCACAAGG ATGTAGAGAT GTTACTTGTC GGTAATCACG CTCCTTTTAC CTGGGGTAAA
ACAGCTGATA AAGCGGTCTA TAATGCCGCT GTGCTGGAAG AAGTAGCACG TATGGCATTT
CTTACGGAGA GTATCCGTCC GGAATGTCCG AAGCTGAAAG AGGCGCTGAT TAAAAAACAT
TTTGAACGCA AACACGGGCC CGATGCTTAT TATGGACAAT AG
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| Protein sequence | MSKQYQGIKE QAYEANMQLP ALGLVLFTFG NVSVVDRAAG VFAIKPSGVP YVQLSPDQMV
IVDFDGNTVE GNSRPSSDTQ THAVLYKHWD DIGGIVHTHS TYATAWAQAQ RDIPVYGTTH
ADHLTADVPC AAPMSDDMIK GNYEYQTGFQ IMQCLQERGL SHKDVEMLLV GNHAPFTWGK
TADKAVYNAA VLEEVARMAF LTESIRPECP KLKEALIKKH FERKHGPDAY YGQ
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