| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3985 |
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| Symbol | |
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| ID | 8360158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4957732 |
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| End bp | 4958691 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644966159 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_003123648 |
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| Protein GI | 256422995 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.875328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCA CAGCATCAAA CGTATCAGAA TCAGGGATTT ATACAATTTT AGGAGCCGGT
GGAATTATCG CGAAGGAGTT AACATCCGTA TTGTTAGAAA ATGGGAAGCA GGTACGCCTG
GTGAGCCGAA AGGTACAGGC GGTAGACGGA GCAAGTGTGA TGGCGGCTGA TATAACAGAT
CCGTTACAGA CCCGGAGAGC TATCAGTGGT TCTTCTGTCG TTTTTTTAGT GGTGGGTCTT
ACCTATAACC ATAAACTATG GCAGGAGGCC TGGCCGAAGA TCATCCAGAA TGTGATCCAT
GCGTGTAGTG AGGGGGGCAT TCCACTGATC TTTTTTGACA ATGTATATAT GTATGGATTG
GTAGATGGAA AGATGACGGA GGACACGCCT TTCAATCCGC GTAGTAAAAA AGGGGAGGTG
AGGGCATTGA TTGCGGGGAA GATCATGGAT AGGGTAAAAG AAGGAAGGCT GACGGCAACG
ATTGCCAGGG CGGCAGATTT CTATGGACCG GGTGCAGATA CTACCGGTAT TCTCAATATG
ATGGTGATAG ATAAGCTGGC GAAAGGTCAG ACAGCGAACT GGCTGGGGAA TGATCATGTA
ACACATAGTT ACACGTATAC ACCTGATGCA GGTAAGGCGT TGTATCTGCT GGCGTCAGAT
CCTTCGACGT ATAACCAGGT ATGGCATCTG CCGACGAAGA ACCCTGCACC TAACGGGAAG
GAATATGTGG AAATGGTTGC AGCAGCATTA CATACGAAGC CGAAGTATAT GAAGCTGGGT
ACCTTTATGA TCAAGCTGGC AGGCTTTTTC AATACTACGA TTGCGGAGTT GCATGAGATG
ATGTATCAGA CAACACATCC TTACATTTTC GATAGTACGA AGTTTGAAAA GCATTTTAAT
TTCACGCCTA CTTCTTACGA AGATGGTATA GCGGCAATTG TAAAAAAGAC CAAAGCTTAG
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| Protein sequence | MSSTASNVSE SGIYTILGAG GIIAKELTSV LLENGKQVRL VSRKVQAVDG ASVMAADITD
PLQTRRAISG SSVVFLVVGL TYNHKLWQEA WPKIIQNVIH ACSEGGIPLI FFDNVYMYGL
VDGKMTEDTP FNPRSKKGEV RALIAGKIMD RVKEGRLTAT IARAADFYGP GADTTGILNM
MVIDKLAKGQ TANWLGNDHV THSYTYTPDA GKALYLLASD PSTYNQVWHL PTKNPAPNGK
EYVEMVAAAL HTKPKYMKLG TFMIKLAGFF NTTIAELHEM MYQTTHPYIF DSTKFEKHFN
FTPTSYEDGI AAIVKKTKA
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