| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3979 |
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| Symbol | |
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| ID | 8360152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4948723 |
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| End bp | 4949385 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644966153 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003123642 |
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| Protein GI | 256422989 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.487116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.704163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGAGT CAAATTATAG AATACTGGTT ATTGAAGAAG ATGCTGCTTT AATAAGAAAG
ATTCAACAGT TATTAACCCT GCATCACTAT GACGTACATA CGTCCAGCAC TGCTGAAGAA
GGTATTTACA TCTGCCGCCA GTACCAGCCC GACATTGTTG TGTGTGGCGT AAAACTGCGT
GGTAGCAGCG GATTTCACTT CCTGATGGAA CTACGGAATG ATACCTCCCT GCAACATATT
CCTTTTATCT TTATCAGCGG TAAAGAAGGA AAAGAAGATA TGCGCATGGG CATGAACCTG
GGCGCGGACG ACTTCCTGTC CAGACCATTC AAAAGCAAAG AATTGCTGAT GAGTATCAAG
TCAAGGCTTA CACGCTTTAC CATTTTTAAT GTACAGCAAA GGGATAAACA CACTACCATT
ATTTCTGTGC CCGCTATACC ACAGGAAGCC CATCACAAAC TCAGCAAAAC AGAATTCAGG
GTCATGCAGA TGATCGCTGA AGGCATGAGC ACAAAAGAAA TCGCACAATC GCTTAACATC
AGTATCAAAA CCGTCGAAAA TCACAGACAC AACATTTCGA AAAAATTAAA CCTGACAGGT
CATAATTCGC TGATCAAATA TGCCATAAAA AACCTCACAC AGCAATACAA AATATTGTCT
TAA
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| Protein sequence | MKESNYRILV IEEDAALIRK IQQLLTLHHY DVHTSSTAEE GIYICRQYQP DIVVCGVKLR
GSSGFHFLME LRNDTSLQHI PFIFISGKEG KEDMRMGMNL GADDFLSRPF KSKELLMSIK
SRLTRFTIFN VQQRDKHTTI ISVPAIPQEA HHKLSKTEFR VMQMIAEGMS TKEIAQSLNI
SIKTVENHRH NISKKLNLTG HNSLIKYAIK NLTQQYKILS
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