Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3928 |
Symbol | |
ID | 8360101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4877110 |
End bp | 4877412 |
Gene Length | 303 bp |
Protein Length | 100 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644966102 |
Product | PAAR repeat-containing protein |
Protein accession | YP_003123591 |
Protein GI | 256422938 |
COG category | [S] Function unknown |
COG ID | [COG4104] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00719724 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0225395 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAACAC CAGCAGCAAG ACTGACTGAT ATGCATACGT GTCCGATGCA GACGCCAGGA CTACCACCTA TACCACATGT CGGCGGACCG ATAGTAGGTC CCGGCGTTCC AACGGTATTA ATAGGGAAAA TGCCTGCCGC CGTGGTAGGT GATAACTGCG TTTGTGTAGG TCCTCCTGAC GCAATCGTTA AAGGCTCCGC CACAGTAATG ATCGGTGGAA AGCCTGCCGC CCGTATGGGC GATACGACCG CGCATGGCGG CAGTATAGTA CTCGGTTGCC CCACCGTATT GATAGGAGGT TAA
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Protein sequence | MGTPAARLTD MHTCPMQTPG LPPIPHVGGP IVGPGVPTVL IGKMPAAVVG DNCVCVGPPD AIVKGSATVM IGGKPAARMG DTTAHGGSIV LGCPTVLIGG
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