| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3892 |
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| Symbol | |
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| ID | 8360065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4845292 |
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| End bp | 4846557 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966066 |
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| Product | hypothetical protein |
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| Protein accession | YP_003123555 |
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| Protein GI | 256422902 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0353742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATCA AAGAAATTAA AGGCGCGGTG CAGGAAGTAG TTGCTCCCGT TGCCACTGAA
GTCAAAGAAG TAAAGGCCGC CGCTGAAGCC GCCAAAACAG CATCCGAAAC CGCAGTTCAA
AAAGCCGAAA CGCTTTCCAG CGAGGTTACC AAAGTCAATG ACGAGGTGAA AGGCTTGAAT
GACTGGAAGG TGAAGAAGGA CGAAGCGGAC AAGAAAAACC AGGAAGCTCT GGATAAATTA
ATCCAGGACA GCGATAAGAA GAACGTTCGC GTCGGCACTG AGCAGAAACA CTTCCGCGAT
TTGCTGGCTG AGTCTATCGA AGAACAGAAA GATAACATCG CCAAATTTGC CCGCAAGGAA
ATTCGTGAGA CGTCTTTTCA GATGAAGGCG GTGGGTGATA TGACCCTGAA CAGTGCAACC
ACATTTCCAA CGGCAAATGT GTCAATCACC GACCTGAGGC CGGGTATTAT CGAACAACCT
AAACGTAGGT TACACATTAG GCAGCTGCTT TCCGGTGGTG CAATGAGTGG CTCTCACTAC
AACTTCGTCA AGGAAATTGC TGGTGAAGGT AATCCGGCAC CTGTCGCTGA AGGCGCACTG
AAACCTCGAC TGGATCTTCG CTTACAGGAA ATGAGCGTAC CAGCTGAAAC TATCGCTGGT
ATTGTGAAGG TATCCCGTAA GATGCTGAAT GACGTACCTG GTCTGATTAC GTTCCTTCAG
TCTCGCCTAC CTGAAAAGCT GCTGAGAGTA GAAGACAATC AGATCCTTAA TGGTAACGGC
GTATCGCCAA ACTTATCTGG TATCACCCAC ACTGGCAACT ATACTCCAGT AGTTAACGAG
TCTACTGTAT GGATAGAACA GCTGGTAGAA GCAATTACCC AAGCAGAAGA AGCCGAGCGC
GATGTGAACG GTATCCTTTT GCGTCCAGCA CAGTATGCAC ATCTTCTGCT AAACCGTGCT
GCAGGTGGAG CTGGTACATA CGATCTGCCT CGTGAACTGG TTACCTATAC AAATGGTCAA
CTGTATGTAA TGGGCGTTCC TGTATTCAAA TCTACAGCAG CAAATCCTGG TCAGTTTATC
GTTGGTGACT GGGTGATGGG CGCTAACCTG ATCGTGAAAG AACCACCTAT CCTTCAGTTC
TTCGAACAGG ATGAAGACAA CGTACAGAAA AACATGGTGA CAGTCCGTAT CGAAGAAACT
ATCGCACTGC CTATTTATGG CAATGACTAT TTCTTCGTTG GCGAATTCGA ACCAGTCACA
ACCTGA
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| Protein sequence | MDIKEIKGAV QEVVAPVATE VKEVKAAAEA AKTASETAVQ KAETLSSEVT KVNDEVKGLN
DWKVKKDEAD KKNQEALDKL IQDSDKKNVR VGTEQKHFRD LLAESIEEQK DNIAKFARKE
IRETSFQMKA VGDMTLNSAT TFPTANVSIT DLRPGIIEQP KRRLHIRQLL SGGAMSGSHY
NFVKEIAGEG NPAPVAEGAL KPRLDLRLQE MSVPAETIAG IVKVSRKMLN DVPGLITFLQ
SRLPEKLLRV EDNQILNGNG VSPNLSGITH TGNYTPVVNE STVWIEQLVE AITQAEEAER
DVNGILLRPA QYAHLLLNRA AGGAGTYDLP RELVTYTNGQ LYVMGVPVFK STAANPGQFI
VGDWVMGANL IVKEPPILQF FEQDEDNVQK NMVTVRIEET IALPIYGNDY FFVGEFEPVT
T
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