| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3774 |
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| Symbol | |
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| ID | 8359943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4751115 |
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| End bp | 4752164 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644965944 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003123437 |
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| Protein GI | 256422784 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0964953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0117202 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTTA GTAAAGACAA TGGAAATGCG GCAGGGCAGC GGAAACTGGT AGTCATTGTG
GCGATGACCA GGCATATGTT GCTTGATTTT ACCGGGCCTG CGGATGTATT TACCAATGCT
GACAGGTTTT TACAGGCCAG GGGCGCCAAC GAGGGATATG AGGTAAGGGT AGTAGCCCCC
ACCTATGATA AAAGAGTGAC CACTTCCGCC GGTATTGAGG TGAATTGTCT ATACTGCGCA
ATGGATATAC AGACGCCAAT TGATACGCTG ATCGTTGCGG GAGATGACTA CTGCCAGTTA
ACGATTGATG AGTTTACGCC GTTTTACGAG TGGTTATCGG GTATTAATGA ACAGAATACC
CGTCGGATAG GGTCGGTTTG TGCCGGCACT TTTGCCCTGG CAAAAGCGGG GCTGTTGGAT
GGCCGGAAGG CGACTACACA CTGGGAGGTA GCGGAAAAAT TAAAAGCACA GTATCCGTCG
ATAGATGTAC ATGGGAATGC GTTTTTTATC CAGGATGGTC ATGTGTATAC ATCGGCTGGT
GTGTCTTCGG GAATAGATCT TTCCCTTGCG CTTGTTGAGG AAGACTATGG AAAAGAGATT
GCTGTGGGGG TGGCACGCCA GCTGGTGTTT TATCTGAGGA GGCCGGGTGT GCAGGCACAA
TTTGGCAACC TGCTTCCTGT TTATGACAAT ACCAACATCG GACAAAAGCT GAAGCTCTGG
CTGAATGAAC GGCTTCATGA GCCTGTAGAT CTTAACAAGA TCGCTGAGAA CTTCAACATG
AGCGTCCGTA ATCTGACGCG TGTATTGCAA AAGCATACCG GTATGCCTCC TGCAAAATTT
ATAGAAAAAC TGCGGGTAGA GAAGGCCCGC GTATTTCTTG AGGATACAGA TATGCTGCTG
GAGCGGATTG TTGAGCAATG TGGGTTCGGT AATCTGATCA CCATGCGACG TATATTTCTG
CGGCAACTTG CTATCACTCC TTCAGACTAC CGCCGCGCTT TTCGTACTTC ATTGAAAGAT
ACCGGCGAAC ACGAACTGTT TCCTGTTTAA
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| Protein sequence | MNVSKDNGNA AGQRKLVVIV AMTRHMLLDF TGPADVFTNA DRFLQARGAN EGYEVRVVAP
TYDKRVTTSA GIEVNCLYCA MDIQTPIDTL IVAGDDYCQL TIDEFTPFYE WLSGINEQNT
RRIGSVCAGT FALAKAGLLD GRKATTHWEV AEKLKAQYPS IDVHGNAFFI QDGHVYTSAG
VSSGIDLSLA LVEEDYGKEI AVGVARQLVF YLRRPGVQAQ FGNLLPVYDN TNIGQKLKLW
LNERLHEPVD LNKIAENFNM SVRNLTRVLQ KHTGMPPAKF IEKLRVEKAR VFLEDTDMLL
ERIVEQCGFG NLITMRRIFL RQLAITPSDY RRAFRTSLKD TGEHELFPV
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