Gene Cpin_3766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3766 
Symbol 
ID8359934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4745345 
End bp4745755 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content46% 
IMG OID644965935 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_003123429 
Protein GI256422776 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.069662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGTAC TATCCAGCGA TAATATGCGC ATTGCGAAAG AGTTGGATAT GGTAGTTTTC 
AGAAACCGAT TGAAGGAATT TGCCGTCAAA ATTGGCATGG GCCTCGTCAA TCAGACTAAA
CTGATCACTG CCGCCAGCGA GCTATCCCGA AACATATTAC GATATGCGGG AGAAGGTACT
GTCCTCATAG AAATAGTCAA CGGCCAACGC CAGAACGGTG TCCGGGTTAC CTTTTCAGAT
AATGGCCCGG GCATTCCAAA CGTAGACCAG GCTATGAAAG ACGGTTTCTC TACCGGTAAA
AGCCTCGGAT TGGGGCTGCC GGGGGCAAAA CGTCTCGTGA GTGAATTTGA TATTAAAAGT
ACGGTGGGTA AAGGAACCAC CATTACAATC ACTAAATGGA AGAATGGATA A
 
Protein sequence
MIVLSSDNMR IAKELDMVVF RNRLKEFAVK IGMGLVNQTK LITAASELSR NILRYAGEGT 
VLIEIVNGQR QNGVRVTFSD NGPGIPNVDQ AMKDGFSTGK SLGLGLPGAK RLVSEFDIKS
TVGKGTTITI TKWKNG