| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3752 |
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| Symbol | |
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| ID | 8359920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4719635 |
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| End bp | 4720873 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965921 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_003123415 |
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| Protein GI | 256422762 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000504236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGATCAGC AAAAGTTGAC AAGTTATCCG AAGGAGAAGA TCAATATTTT ATTGTTGGAA
AATATCAGCG ATGCCGCGGC AGCGGAGTTT TCATCGGCGG GGTATGCCAA CGTAAAAAGA
TTGTCGGGCG CATTAGGCGA GGAAGATCTG ATCCGTGAAG TGAAAGACGT TCATCTGCTG
GGTATCCGTT CGAAGACGCA GGTTACCAGG AAAGTGCTGG AAGCTGCTAC CAAGTTACAG
GCGGTGGGCT GTTTCTGTAT CGGTACGAAT CAGGTAGATC TGAAGAGTGC CCGTGAGCTG
GGTGTGGCTG TATTTAACGC TCCTTATTCC AATACACGTT CTGTAGCGGA ACTGGTGATT
GGTTTGTCCA TTATGCTGAT TCGCCGTATT CCGGATAAGA ATGCGGCAGC GCATGACGGT
ATCTGGATGA AGGAAGCAAA AGGCAGTTAC GAACTGCGTG GTAAATCACT GGGTATCGTG
GGTTATGGTA ATATCGGTAG TCAGGTTAGC GTACTGGCCG AGGCGCTGGG TATGAACGTA
TTCTACTACG ATGTGGAAAC CAAATTGCCA CTGGGTAATG CGGTACAGTT ACGTTCACTG
GAAGCGCTGT TTGCGCAGGC GGATATTATC TCCCTGCACG TTCCGTCTAC CAAGACCACC
GCAAACATGA TCAATAAAGA AACCCTGAAA CATACGAAGA AGGGCGCTAT TTTCATCAAC
TATGCCCGTG GCGAAGTGGT GGAACTGGAT GACCTGAAAG AGGCGCTGGT AAGCGGTCAG
CTGTCAGGTG CGGCGATTGA CGTGTTCCCG GTTGAACCTG AAAAAAATGG TGCGGCATTT
TCCACTCCTT TGCAAAAATT ATCTAATGTG ATTCTGACAC CACATATCGG TGGAAGTACA
GAAGAGGCAC AGCATAATAT TGGTCTGGAT GTAAGCGCGA AAATGCTGAA CTACCTGGAG
AAAGGGGCGA GCTTTGGTTC TCATACCATT CCGGCGATCA GTGTACCGGC TGTAGATCAT
ACACACCGTA TCCTGCATAT TCACGAGAAC GTGCCGGGTG TATTGTCAGA GATTAACACT
GTATTATCTC AGAATAAGAT CAACATCCTG GGGCAGTATC TGAAAACGAA TGACGCTATT
GGTTATGTGG TGCTGGACGT GGATAGTAAG TTATCCAAAG AAGCATTTGC ATTGCTGAAA
GATGTGAATC ATACTATTAA AACAAGACTA CTTTACTAG
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| Protein sequence | MDQQKLTSYP KEKINILLLE NISDAAAAEF SSAGYANVKR LSGALGEEDL IREVKDVHLL
GIRSKTQVTR KVLEAATKLQ AVGCFCIGTN QVDLKSAREL GVAVFNAPYS NTRSVAELVI
GLSIMLIRRI PDKNAAAHDG IWMKEAKGSY ELRGKSLGIV GYGNIGSQVS VLAEALGMNV
FYYDVETKLP LGNAVQLRSL EALFAQADII SLHVPSTKTT ANMINKETLK HTKKGAIFIN
YARGEVVELD DLKEALVSGQ LSGAAIDVFP VEPEKNGAAF STPLQKLSNV ILTPHIGGST
EEAQHNIGLD VSAKMLNYLE KGASFGSHTI PAISVPAVDH THRILHIHEN VPGVLSEINT
VLSQNKINIL GQYLKTNDAI GYVVLDVDSK LSKEAFALLK DVNHTIKTRL LY
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