Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3750 |
Symbol | |
ID | 8359918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4717163 |
End bp | 4718143 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644965919 |
Product | cation diffusion facilitator family transporter |
Protein accession | YP_003123413 |
Protein GI | 256422760 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.220836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0009443 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGCAGAGAA GAGACTTACG CGTTATATTA ATTTCACTGA TCGTCAGTTT TGTTTTAACG GGGACCAAGT TTGCTGCCTG GTTCCTGACC CATTCTGTTG CCATCCTGTC TGATGCGCTG GAGTCCATTA TCAATGTTGT GGCCGGGGCT TTTGCCTGTT ACAGTATTTA TCTTACCAGG AAACCGAAAG ATGAAAATCA TCCTTACGGG CATGGGAAGG TGGAGTTTTT TTCTATTGGT TTTGAAGGTG CGATGATCTT TATTGCCGGT TGTCTTATTC TTTTCAAGGC AGGGCAATAC TTCTTTATTC CTACGGAACT GAATAAACTG GATAAGGGTG TCTGGCTGAT AGCAGGTACG ACGCTGGCCA ATCTGTTACT GGGTCTTTTC CTGGCACGGG AGGGGAAGAA ACTGAACTCT ATGACTATTA CTGGCAATGG TCAGCATATT ATGACGGATG TTTATAGTAG TCTGGGATTG ATCGCGGCTT TGCTGATTAT ACATTTTACC GGCTGGAAAT GGATAGATCC GGCGGCGTCT GCGCTGATGG GTGTATTGAT TTTACGTCAG GGGTATCAGT TGCTGCGGAC TTCAATATCC GGTCTGATGG ACGAAACGGA TATGCGTGTA GTGGATAAGG TGATACAGGT GTTGTCTGCA CATCGTGGGG AGCGCTGGAT TGATGTGCAT AATATGCGGG TGCAGCAATA TGGTAATAAT TATCACATTG ACTGTCATCT GACTTTACCC TATTACCTGG AACTGAGTGA CGCGCACGAG GAGTTAAAGG CGATTGAGCG GCTGGTCAAT GATGCTTTTT CCTCCGGAGA AGTAGAATTT TTTATACATA CGGACCCTTG TATTCCGTCC TGCTGTCATT ATTGTCAGAT GCAAAACTGT CCGGTGCGGC AGGAAGCCTT TTCGGGGCTT ATTGAATGGA AGAGAGAGAA CGTCCTGCCC AACAGAAAGC ATGGGGAGTA A
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Protein sequence | MQRRDLRVIL ISLIVSFVLT GTKFAAWFLT HSVAILSDAL ESIINVVAGA FACYSIYLTR KPKDENHPYG HGKVEFFSIG FEGAMIFIAG CLILFKAGQY FFIPTELNKL DKGVWLIAGT TLANLLLGLF LAREGKKLNS MTITGNGQHI MTDVYSSLGL IAALLIIHFT GWKWIDPAAS ALMGVLILRQ GYQLLRTSIS GLMDETDMRV VDKVIQVLSA HRGERWIDVH NMRVQQYGNN YHIDCHLTLP YYLELSDAHE ELKAIERLVN DAFSSGEVEF FIHTDPCIPS CCHYCQMQNC PVRQEAFSGL IEWKRENVLP NRKHGE
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