Gene Cpin_3750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3750 
Symbol 
ID8359918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4717163 
End bp4718143 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content46% 
IMG OID644965919 
Productcation diffusion facilitator family transporter 
Protein accessionYP_003123413 
Protein GI256422760 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.220836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0009443 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCAGAGAA GAGACTTACG CGTTATATTA ATTTCACTGA TCGTCAGTTT TGTTTTAACG 
GGGACCAAGT TTGCTGCCTG GTTCCTGACC CATTCTGTTG CCATCCTGTC TGATGCGCTG
GAGTCCATTA TCAATGTTGT GGCCGGGGCT TTTGCCTGTT ACAGTATTTA TCTTACCAGG
AAACCGAAAG ATGAAAATCA TCCTTACGGG CATGGGAAGG TGGAGTTTTT TTCTATTGGT
TTTGAAGGTG CGATGATCTT TATTGCCGGT TGTCTTATTC TTTTCAAGGC AGGGCAATAC
TTCTTTATTC CTACGGAACT GAATAAACTG GATAAGGGTG TCTGGCTGAT AGCAGGTACG
ACGCTGGCCA ATCTGTTACT GGGTCTTTTC CTGGCACGGG AGGGGAAGAA ACTGAACTCT
ATGACTATTA CTGGCAATGG TCAGCATATT ATGACGGATG TTTATAGTAG TCTGGGATTG
ATCGCGGCTT TGCTGATTAT ACATTTTACC GGCTGGAAAT GGATAGATCC GGCGGCGTCT
GCGCTGATGG GTGTATTGAT TTTACGTCAG GGGTATCAGT TGCTGCGGAC TTCAATATCC
GGTCTGATGG ACGAAACGGA TATGCGTGTA GTGGATAAGG TGATACAGGT GTTGTCTGCA
CATCGTGGGG AGCGCTGGAT TGATGTGCAT AATATGCGGG TGCAGCAATA TGGTAATAAT
TATCACATTG ACTGTCATCT GACTTTACCC TATTACCTGG AACTGAGTGA CGCGCACGAG
GAGTTAAAGG CGATTGAGCG GCTGGTCAAT GATGCTTTTT CCTCCGGAGA AGTAGAATTT
TTTATACATA CGGACCCTTG TATTCCGTCC TGCTGTCATT ATTGTCAGAT GCAAAACTGT
CCGGTGCGGC AGGAAGCCTT TTCGGGGCTT ATTGAATGGA AGAGAGAGAA CGTCCTGCCC
AACAGAAAGC ATGGGGAGTA A
 
Protein sequence
MQRRDLRVIL ISLIVSFVLT GTKFAAWFLT HSVAILSDAL ESIINVVAGA FACYSIYLTR 
KPKDENHPYG HGKVEFFSIG FEGAMIFIAG CLILFKAGQY FFIPTELNKL DKGVWLIAGT
TLANLLLGLF LAREGKKLNS MTITGNGQHI MTDVYSSLGL IAALLIIHFT GWKWIDPAAS
ALMGVLILRQ GYQLLRTSIS GLMDETDMRV VDKVIQVLSA HRGERWIDVH NMRVQQYGNN
YHIDCHLTLP YYLELSDAHE ELKAIERLVN DAFSSGEVEF FIHTDPCIPS CCHYCQMQNC
PVRQEAFSGL IEWKRENVLP NRKHGE