| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3742 |
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| Symbol | thrS |
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| ID | 8359910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4703352 |
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| End bp | 4705292 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644965911 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_003123405 |
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| Protein GI | 256422752 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.190527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00137888 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCAACA TTACATTACC GGATGGCGCA GTTCGTCAGT ATGAAGCAGG AGTAACTGCC
ATGGATGTTG CCAAGTCCAT CAGCGAAGGA TTGGCAAGAA AAGTTTTGGC CGCTAAATTT
AATGGCGAGG TGACGGATGC GTCCCGCCCC ATTACCACGG ATGGCACGCT TCAGCTATTG
ACATGGAACG ATACGGACGG TAAATCTACC ATGTGGCACT CTTCTGCTCA CCTGATGGCA
GAAGCACTGG AAGCGTTGTA TCCCGGGGTG AAACTGGGTA TCGGACCTGC TATTGAAAAC
GGGTTCTATT ACGATATTGA CCTGGGAGGG CGCAGTATTT CTGAAGAGGA TCTGCAGAAG
ATCGGCGACA AGATGGCTGA ACTGGCAAAG AACAACAGCG TCTACGAGCG CCGTGAAGTC
AGCAAAGCCG ACGCAGAAAA ATACTTCACC GAAAAGAACG ACGAGTATAA ACTGGAACTG
ATCAGGGATC TGAAGGATGG TTCCATCACT TTCTATACAC AAGGTAACTT TACGGACCTG
TGTCGCGGAC CACACATCCC GAACACCGGT TTCATCAAAG CTATCAAGCT GACTAACATT
GCCGGCGCTT ACTGGCGTGG TAATGAGAAA AATAAGATGC TGACCCGTAT TTACGGTATC
ACTTTCCCTA CACAGAAGGA GCTGGATGAA TACCTGCACC TGGTGGAAGA GGCAAAAAAA
CGTGACCACC GTAAACTGGG TAAGGAACTG GAACTGTTCA CTTTCTCTGA AAAAGTAGGT
CTTGGTCTGC CTTTATGGTT GCCAAAAGGC GCTATGCTGC GTGAACGCTT ACAGAGCTTC
CTGCAGAAAG CACAGATCGA AAGTGGTTAT ATGCCGGTGG TAACGCCGCA TATCGGTAAC
AAGAATCTGT ACATCACTTC CGGTCACTAC GAGAAATATG GTAAAGACAG CTTCCAGCCG
ATCCATACGC CGGAAGAAGG CGAGGAGTTC ATGCTGAAGC CGATGAACTG TCCGCACCAC
TGTGAGATTT ATAAATCCAG TCCGAAGAGC TATAAAGACC TGCCGGTTCG TTTTGCAGAA
TTCGGTACCG TATACCGTTA CGAGCAGCAT GGTGAACTCC ATGGCCTGAC CCGTGTACGT
GGATTTACTC AGGATGATGC GCACCTTTTC TGTCGTCCTG ACCAGGTAAA AGAAGAGTTC
TGTAAAGTAA TCGACCTGGT ACTGTATGTG TTCCAAAGTC TGAATTTCAC CGATTATACT
GCTCAGATTT CCCTGCGTGA TCAGGAAGAC AGGGCTAAAT ACATCGGTAG CGATGAAAAC
TGGAACCTCG CTGAACAGGC AATTATTGAA TCAGCAGCGG AGAAAGGTTT GAAAACAGTC
GTAGAATACG GTGAGGCCGC GTTTTACGGA CCAAAACTGG ACTTCATGGT GAAAGACGCC
CTCGGCCGTA AATGGCAGCT GGGTACCATC CAGGTGGATT ATAACCTGCC GGAGCGTTTT
GAACTGGAGT ATGTAGGTGC TGATAACCAG AAACATCGCC CGGTGATGAT CCACCGTGCA
CCATTCGGTT CACTGGAGCG TTTCATTGCG GTACTGATCG AACACTGTGG TGGTAAATTC
CCGCTGTGGC TGACACCAAC CCAGGTAAAG ATCCTGCCGA TCAGTGACAA GAACCAGGAA
TATGCAGAAA AAGTAGCAGA ATTGCTGAAA AATGTTGAAA TTCGCGCAGA AATTGATGAC
CGTAGCGAGA AGATAGGTAA AAAGATCAGG GAAACTGAAC TTGCAAAGAT ACCTTACATG
CTCGTGATCG GTGAGAAGGA AGCTGCTGAA AGCAAAGTCG CGGTACGCAG ACAAGCAAAA
GGCGACCTCG GCGCGATGGA CATTGATCAA TTCATTGCAC TCGTAAAAGA GGAAGTAGTT
AGCAGAAAAC CGTTCGAATA A
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| Protein sequence | MINITLPDGA VRQYEAGVTA MDVAKSISEG LARKVLAAKF NGEVTDASRP ITTDGTLQLL
TWNDTDGKST MWHSSAHLMA EALEALYPGV KLGIGPAIEN GFYYDIDLGG RSISEEDLQK
IGDKMAELAK NNSVYERREV SKADAEKYFT EKNDEYKLEL IRDLKDGSIT FYTQGNFTDL
CRGPHIPNTG FIKAIKLTNI AGAYWRGNEK NKMLTRIYGI TFPTQKELDE YLHLVEEAKK
RDHRKLGKEL ELFTFSEKVG LGLPLWLPKG AMLRERLQSF LQKAQIESGY MPVVTPHIGN
KNLYITSGHY EKYGKDSFQP IHTPEEGEEF MLKPMNCPHH CEIYKSSPKS YKDLPVRFAE
FGTVYRYEQH GELHGLTRVR GFTQDDAHLF CRPDQVKEEF CKVIDLVLYV FQSLNFTDYT
AQISLRDQED RAKYIGSDEN WNLAEQAIIE SAAEKGLKTV VEYGEAAFYG PKLDFMVKDA
LGRKWQLGTI QVDYNLPERF ELEYVGADNQ KHRPVMIHRA PFGSLERFIA VLIEHCGGKF
PLWLTPTQVK ILPISDKNQE YAEKVAELLK NVEIRAEIDD RSEKIGKKIR ETELAKIPYM
LVIGEKEAAE SKVAVRRQAK GDLGAMDIDQ FIALVKEEVV SRKPFE
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