Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3716 |
Symbol | |
ID | 8359884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4668879 |
End bp | 4670081 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644965885 |
Product | glycosyl transferase group 1 |
Protein accession | YP_003123379 |
Protein GI | 256422726 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.668211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0620959 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCACTTA TCAGGAATCG GGATATAGTT ATCATTGGAT TACAACAGTG GTATACCCCA ATAGGAAGTA ATTGTAAGAA TATAGCTTTG CAATTTGCGC GCCATAACCG CGTGTTATAT GTAAACACTC CACTCGACAG AAATACCATC CTGCAACAGA AGGATGATCC CAACGTCGCT TATCACCTTA AGACTATACA GAAAAAAGAG CCTTCGATCG TACCTGTACG GGAAAATCTA TGGAGCTATT ATCCTTCTGC AGTCCTTGAA TCGATCAACT GGTTACCGGC GCCTGCCTCG CCTGTCTTCT CCTGGTTAAA CAAACGGAAC AACAGGAAGT TTGCAGCGAG CATTAAAGAA GCGATGGATG AACTGGGGTT CAAAGATGTT ATCCTCTTCA ATGATAACGA TATTTTCCGT GGTTTTTACA TGAAAGAGCT GCTGAAACCT GCTACTTACA TCTACTACAG CAGGGACTAC CTGCTGGGCG TGGATTACTG GAAGAAGCAC GGCGAAAAGA TCGAACCTTT GCATATTGCC AAGGCGGATG TAGCGGTAGC GAACTCTAAT TACCTCGCAG ATATTCTTAA AAAATATAAT CCGAACAGTT ATTACGTCGG ACAGGGCTGC GACCTAAGTC TGTTTGACGT CACGCAGGGA TATGCCATTC CCGAAGATGT GAAGGGCATT AAAGGCCCTG TTATTGGCTA TGTAGGCGCC CTGAATGCCC ACAGGTTAGA CCCGGGTATT ATTGAACATA TTGCACGGGA AAAGAAGGAC TGGTCGATTG TACTGGTAGG TCCGGAAGAC GAGACTTTCC AGAAATCTGT GTTGCACGAG CTCCCCAACG TACACTTCCT TGGCAGAAAA GAACTGAAAG AACTACCGGC CTATATTAAG GCATTTGATA TATGTATCAA TCCACAGCAG GTGAATGTAC TGACTGTCGG CAATTATCCG TTAAAAATAG ACGAATACCT GGCTTTAGGA AAGCCGGTTG TGGCCACAGC CACCAGAACG ATGGAATTCT TCGATTCTCA CACTTATCTT GCCCGGAATG CAAATGAGTA TGTTACGCTG ATCAGTAAGG CCCTGGCAGA AGACAATATG ACGCTGCAGG AACAACGGAT CGCCTTTGCC AGATCCCATA GCTGGGAAAA CTCCGTAACT GCTATTTATG AGGCAATATT AAATACCGCT TGA
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Protein sequence | MSLIRNRDIV IIGLQQWYTP IGSNCKNIAL QFARHNRVLY VNTPLDRNTI LQQKDDPNVA YHLKTIQKKE PSIVPVRENL WSYYPSAVLE SINWLPAPAS PVFSWLNKRN NRKFAASIKE AMDELGFKDV ILFNDNDIFR GFYMKELLKP ATYIYYSRDY LLGVDYWKKH GEKIEPLHIA KADVAVANSN YLADILKKYN PNSYYVGQGC DLSLFDVTQG YAIPEDVKGI KGPVIGYVGA LNAHRLDPGI IEHIAREKKD WSIVLVGPED ETFQKSVLHE LPNVHFLGRK ELKELPAYIK AFDICINPQQ VNVLTVGNYP LKIDEYLALG KPVVATATRT MEFFDSHTYL ARNANEYVTL ISKALAEDNM TLQEQRIAFA RSHSWENSVT AIYEAILNTA
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