Gene Cpin_3715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3715 
Symbol 
ID8359883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4668245 
End bp4668874 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content48% 
IMG OID644965884 
Productacetyltransferase (isoleucine patch superfamily)-like protein 
Protein accessionYP_003123378 
Protein GI256422725 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.780244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0511861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAC TTACAAGTCT GAAAACAAGG ATTAAAAGCA ATCCTAACCT CAAACAGTTT 
GCGCACCGTA TGATTATGCC TAAAAACCAG GCAAAACCCC GGTTGTGGAT CCGCTGGATA
GTGAACCCTT TTATACATAA AAGAGGGAAA GGCGCTATTG TACGCCGTTA TACCCGGTTG
GACGTCTTTC CTTTTAATCC GTTCTCCCTG GGAGCCGGAT CCATTATTGA AGACTTTGCC
ACTGTCAATA ACGGGATGGG CGCTGTGACC ATTGGTGATC GTGTGCAGGT AGGTATGGGT
AATGTGATCA TCGGACCGGT AACCATCGCC GACAATGTCA TTATCGCGCA GAATGTGGTC
ATGTCGGGAC TGAACCATGG CTACCAGGAT ATCAGTATGC CTATCGGATT ACAACCCTGC
TCTACCAGTG AGATCTATAT AGGTGAAGAT AGCTGGATCG GCGCCAATGC CGTTATTACG
GCTGGTGTCA GGATAGGTGA ACATGCCGTG GTAGCTGCCG GAAGCGTAGT CACCAAAGAC
GTACCTGCTT ACAGCGTAGT GGGCGGTAAT CCGGCCAAAG TACTTAAACA ATACAATCCC
GAAACGAAAT TATGGGAAAG GGTACGCTAA
 
Protein sequence
MSTLTSLKTR IKSNPNLKQF AHRMIMPKNQ AKPRLWIRWI VNPFIHKRGK GAIVRRYTRL 
DVFPFNPFSL GAGSIIEDFA TVNNGMGAVT IGDRVQVGMG NVIIGPVTIA DNVIIAQNVV
MSGLNHGYQD ISMPIGLQPC STSEIYIGED SWIGANAVIT AGVRIGEHAV VAAGSVVTKD
VPAYSVVGGN PAKVLKQYNP ETKLWERVR