Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3710 |
Symbol | |
ID | 8359878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4657061 |
End bp | 4658962 |
Gene Length | 1902 bp |
Protein Length | 633 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644965879 |
Product | asparagine synthase (glutamine-hydrolyzing) |
Protein accession | YP_003123373 |
Protein GI | 256422720 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0641496 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.029694 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTGGGA TAGCAGGGTT TATTGATTTC TCCAAAAAAG CCAGTCTCCC CGTACTGAAA GACATGACAG ATGCATTATT GCATCGCGGT CCGGATGACG GTGGTTATGA AGTGTATGAA CACCCCAATG CAGTGATCGG ACTGGGCCAG CGCCGACTGT CTATTCTTGA CCTTTCCAGT GGTGGCCATC AGCCCATGCA CTATAAACAA TACACCATGA TCTTTAATGG CGAGGTGTAT AATTTCAAAG AGATCCGTCA TGAACTGGAA CAGAACGGTT ATCACTTTAC TTCCACCAGT GATACGGAAG TACTGATCAA AGGATACGAT TGCTGGAAAG AAAAGATCGT AGACCGTTGT ATCGGTATGT TTGCTTTTGT GATCTATGAC AAGGAAGAGC AACAGGTGAT TTTCTGTCGT GACAGAGCGG GTGTAAAACC ACTTTACTAT TACTGGCACA ACAACGTGCT GCTGTTTGCT TCAGAACTGA AAAGTTTCAG CCGTTTCCCT GCTTTTGAAA AGAAGATCGA CGTGAACGCG GTATCGCTGT TTCTGCAATA CAGCTATATT CCGGCGCCTT ACACGGTTTT CGAACATACG CATAAACTGA AACCGGGACA TTACATGCAT TTGTCCCTTA CCAATAAAGC ACTGACGACT TCCGAGTACT GGAGCGTACT GGATGCTTAC CGCCAGCCGC TGACAGACAT GTATGAAGGC GACATCATCC GTCATACCAA AGAACTGATG GAAAGCGCTT ACCGTTACAG AATGGTAGCT GATGTACCTG TCGGTGTATT CCTGAGTGGC GGTTATGATA GCTCCAGTGT GGCGGCTATT TTACAGGCAT CCTCCGGCAG CCGGCTGAAG ACCTTCACGA TCGGTTACAA AGAAGCCGCA TTCGATGAAT CTAAAGAGGC ACGCAGAATT GCACAGCATC TGGGTACTGA CCATACAGAA TGGATCGTAG GTCCTTCTGA CGCAAAGAAC ATCCTGGAAC ACCTGCCGGA GATCTACGAT GAACCATTCG CAGATAACTC TACCGTACCT ACCACGCTGG TCAGCAAACT GGCTGCGCAG CAGGTGAAAG TGGTACTTTC TGCTGATGGT GGCGACGAAC TCTTTGCAGG CTATAACAAG TTCAATCAGT CCCTGCAGTA TACAGAACGT TTCCCTAAAT CCATACAGGG AATGGTCAGT AAGGTGATGA ATATGGTAGA TCCTGCCAGC ATCCCTTATT TCAATAAACA ATACAACTTT GCCAGCCGTT ATGAGAAGAT GAAGCTCATA TGGAAATCCG GTAAATCACA GCAGGCATTA AAATATATCA GCCAGTATAT TACAGAGTCA GAAGCAGCCA GTTATCTGGG TGGAGCGCAT TCCACTTACA AGACGAACTT TGATATGAAC GGGGAACTGA ATAGTATCAA TGATCCGCTG AACCGCTTAC TGTCTGTAGA CTACAAGACA TTCCTGGTTG ACAATAACCT GGTAAAGGTA GACAGGGCGA CCATGTCTGT CAGCATTGAA GGCCGCGAGC CGATGCTGGA TCACAGACTG GTGGAGTTCC TGGCGAAAGT GCCTGCGCAT ATTAAAGTGA AGAATAAGAT CAACAAGTAT ATTCTGAAGG AGATTGTACA CCAGTATATC CCTAAAACTT TAATGGACCG TCCCAAACGT CCGTTTATCG CTCCGCTGAC GCATTGGTTT AAAGACGAGC TGAAAGAACA GATGGAATAC TATCTGTCTC CGGCTAAACT GAAACAGACC GGCATCTTTG ATCCCTCACA TATCGAAACA CTGAAGCAGA ACTACTTTAA CGGCGGAAAG GTGAGCCACC AGAAACTCTG GAACATCCTC GTATTCCAGT TATGGTACAG CAGATGGATG GAACAATTGT AA
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Protein sequence | MCGIAGFIDF SKKASLPVLK DMTDALLHRG PDDGGYEVYE HPNAVIGLGQ RRLSILDLSS GGHQPMHYKQ YTMIFNGEVY NFKEIRHELE QNGYHFTSTS DTEVLIKGYD CWKEKIVDRC IGMFAFVIYD KEEQQVIFCR DRAGVKPLYY YWHNNVLLFA SELKSFSRFP AFEKKIDVNA VSLFLQYSYI PAPYTVFEHT HKLKPGHYMH LSLTNKALTT SEYWSVLDAY RQPLTDMYEG DIIRHTKELM ESAYRYRMVA DVPVGVFLSG GYDSSSVAAI LQASSGSRLK TFTIGYKEAA FDESKEARRI AQHLGTDHTE WIVGPSDAKN ILEHLPEIYD EPFADNSTVP TTLVSKLAAQ QVKVVLSADG GDELFAGYNK FNQSLQYTER FPKSIQGMVS KVMNMVDPAS IPYFNKQYNF ASRYEKMKLI WKSGKSQQAL KYISQYITES EAASYLGGAH STYKTNFDMN GELNSINDPL NRLLSVDYKT FLVDNNLVKV DRATMSVSIE GREPMLDHRL VEFLAKVPAH IKVKNKINKY ILKEIVHQYI PKTLMDRPKR PFIAPLTHWF KDELKEQMEY YLSPAKLKQT GIFDPSHIET LKQNYFNGGK VSHQKLWNIL VFQLWYSRWM EQL
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