Gene Cpin_3675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3675 
Symbol 
ID8359842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4612334 
End bp4612771 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content45% 
IMG OID644965844 
ProductDoxX family protein 
Protein accessionYP_003123338 
Protein GI256422685 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00136141 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.200959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTAC TACAACGAAT AGACCGTTGG GGTGAGACGC ATCATCCGCG TTGGCTGGAT 
GCTATACGTG TACTCCTGGG AGTCTTTTTA TTCTACAAAG GGGTGGTTTT CATACAAAAT
ATCGATGTTC TTAAATCTGT GATCAACGAA AATCCGGTCC TCACAGTAAT GTCGTTCTGG
CTTGCTCACT ACATTGTCTT TGCTCATCTG GCTGGTGGAG TACTTATTAT TTTCGGCTTA
CTTACACGCG TGGCTATTCT TGCCAACATT CCCATCTTAA TCGGCGCCAT CTTTTTTGTA
CATACCTCTA CAGGGTTATT TAATGTACAT GGTGAAGCCG GCCTTTCTAT CCTTGTTCTG
CTGTTACTTG TCTTCTTCCT TGTGGAGGGC AGCGGCCCCA TTTCGTTTGA CGAATATATG
CGCCGTCACC CGGCATGA
 
Protein sequence
MNLLQRIDRW GETHHPRWLD AIRVLLGVFL FYKGVVFIQN IDVLKSVINE NPVLTVMSFW 
LAHYIVFAHL AGGVLIIFGL LTRVAILANI PILIGAIFFV HTSTGLFNVH GEAGLSILVL
LLLVFFLVEG SGPISFDEYM RRHPA