Gene Cpin_3668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3668 
Symbol 
ID8359835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand+ 
Start bp4604555 
End bp4605187 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content51% 
IMG OID644965837 
Productdethiobiotin synthase 
Protein accessionYP_003123331 
Protein GI256422678 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0132] Dethiobiotin synthetase 
TIGRFAM ID[TIGR00347] dethiobiotin synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.192292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.110167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGC GGATATTTAT TACCGGTATA GGGACCGGGG TGGGGAAAAC AGTGACGGCC 
GCCTGCGTAG TGGAAGCGCT ACAGGCAGAT TACTGGAAAC CAATACAGAG TGGGTTATCA 
GAAGGGACGG ATACCGATAC GGTGAAAAGT CTGATATCCA ATCCTGTGAC GGTTTGTCAC 
CCGGAAGCAT ATCGCCTGGA AGCCCCGGCT TCGCCACACC TGGCGGCGAG AATGGAAAAC 
ATTCAGATCG ACGTGGATAA GGTGGTGGCA CAGGTAGGGG GAATGCAGCC TTCCGGACGA 
CCTTTGGTGA TTGAAGGCGC CGGCGGACTG ATGGTACCGT TGACAGAGCA GATCTTTACT 
ATTGACTTTA TAGCGCAACT AAAAGCCAGC ATCATTATCG TGAGCCAGAA TTATCTGGGG 
AGTATCAATC ACGCATTACT GACGGCACAG GTACTAAAAC AACGTGGCAT CCCTGTGTTA 
GGGTGGATTT TCAGCGGAGA TTATCATACC AATGAGACGG AAGTGGTAGC TTGGAGCGGT 
TATCCGCAAT TGGGAAGGAT CCCTCACACT GCACTGATAG ACAGGGCATT TGTGAAGGAA 
CAGGCAGAAA AGTTATCTTT GGGGCAATTC TGA
 
Protein sequence
MSQRIFITGI GTGVGKTVTA ACVVEALQAD YWKPIQSGLS EGTDTDTVKS LISNPVTVCH 
PEAYRLEAPA SPHLAARMEN IQIDVDKVVA QVGGMQPSGR PLVIEGAGGL MVPLTEQIFT 
IDFIAQLKAS IIIVSQNYLG SINHALLTAQ VLKQRGIPVL GWIFSGDYHT NETEVVAWSG 
YPQLGRIPHT ALIDRAFVKE QAEKLSLGQF