| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3630 |
|---|
| Symbol | |
|---|
| ID | 8359797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 4556394 |
|---|
| End bp | 4557593 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644965799 |
|---|
| Product | cobalamin synthesis protein P47K |
|---|
| Protein accession | YP_003123293 |
|---|
| Protein GI | 256422640 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0523] Putative GTPases (G3E family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0621429 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACGA ACAGATTACC TGTTACTGTG CTGAGTGGCT TTCTCGGTGC TGGTAAGACT
ACTTTGCTCA ATCATGTCCT GCATAATAAA CAGGGGATGA AAGTGGCTGT CATCGTCAAT
GACATGAGCG AAGTGAATGT AGATGCCCAA CTCGTAAGGA ACGAGCAGAC ATTACATAGA
ACGGAAGAAA AACTGGTAGA GATGAGTAAC GGTTGTATCT GTTGTACGTT GCGGGAAGAC
CTGCTGATAG AAGTGGAAAG ACTGGCAAAA GAAGGCCGTT TCGATTATCT CCTGATCGAA
AGTTCTGGTA TCAGCGAGCC ATTACCTGTC GCGCAGACAT TTACCTACCA GGATGAAACA
ACAGGTACTG ATCTGAGCAG GTTGTCAAGG CTGGACACAT TGGTAACAGT GGTCGATGCG
TTTAATTTCA TCCGCGATTT CAGCAGCATC GAAACCTTAC AGGACCGACA GATTACCGAT
ATGGAAGGCG ATTACAGGAC AATTGTCAAT CTGCTCACTG ATCAGATCGA ATTCGCCAAT
GTGATCATCC TGAACAAAAC AGATCTTGTC ACAGCAGAAG AATTGGGTAT GCTGCACGCG
GTGATCAAAA AAATGAATGC CGGCGCACAT ATTGTCGACG CTTCATTTGG AAAAGTAGAC
CTGCATAGTA TTTTAAATAC CAGTCTGTTT GATTTCGAAG AAACCAGTCA GCAGGCAGGA
TGGATAGAAG AACTCCACAA ACCTGCGCAT ACACCAGAGA CAGAAGAATA CGGTATCAGT
AGTTTTGTGT ACCGCAGCCG CCGTCCTTTT CATCCGGAAC GCTTCTGGAC TTACTTAAAC
CAGGAGTGGC ATTCCAATAT CATTCGCAGT AAAGGACTTT TCTGGCTGGC TTCCCGCAGG
GATGAAGCCC TGAACTGGAG TCAGGCAGGT GGGAGTCTGC GGGCAGAACG TGCCGGTGTA
TGGTGGGATA GTATGCCTTA TAAAGACAGG ATACGATATG TTTCCTTCCT TGATAACCAA
CAGGAAATTG AAAAACGATG GGATAAACGT TTCGGTGATC GCCAGAATGA ACTTGTAATC
ATCGGACGCA CACTTGACAG AGACGCTATT GTAAAAGAGC TCGAAGATTG TCTTTGTGAT
GACAATGAGA TCGCAAAAAT GGAAATAGGA GGGACTTTCC GGGACGAGTT CCCGCTATAG
|
|---|
| Protein sequence | MTTNRLPVTV LSGFLGAGKT TLLNHVLHNK QGMKVAVIVN DMSEVNVDAQ LVRNEQTLHR
TEEKLVEMSN GCICCTLRED LLIEVERLAK EGRFDYLLIE SSGISEPLPV AQTFTYQDET
TGTDLSRLSR LDTLVTVVDA FNFIRDFSSI ETLQDRQITD MEGDYRTIVN LLTDQIEFAN
VIILNKTDLV TAEELGMLHA VIKKMNAGAH IVDASFGKVD LHSILNTSLF DFEETSQQAG
WIEELHKPAH TPETEEYGIS SFVYRSRRPF HPERFWTYLN QEWHSNIIRS KGLFWLASRR
DEALNWSQAG GSLRAERAGV WWDSMPYKDR IRYVSFLDNQ QEIEKRWDKR FGDRQNELVI
IGRTLDRDAI VKELEDCLCD DNEIAKMEIG GTFRDEFPL
|
|---|
| |